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LAC_acetylene_scaffold_39542

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LAC_acetylene_scaffold_39542_1
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3..401
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037662FA
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ADK81180.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
LAC_acetylene_scaffold_39542_2
unknown

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576..1232
DNA (657bp) protein (219aa)

This feature has no annotations

LAC_acetylene_scaffold_39542_3
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(1308..3890)
DNA (2583bp) protein (861aa)
radical SAM domain-containing protein id=3460417 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Radical SAM domain-containing protein
Tax=GWC1_Treponema_61_84_curated
LAC_acetylene_scaffold_39542_4
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3887..5206)
DNA (1320bp) protein (440aa)
Rod shape-determining protein RodA n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YHX7_TREPZ
mrdB; rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:AEF86699.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
LAC_acetylene_scaffold_39542_5
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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comp(5203..7080)
DNA (1878bp) protein (626aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3F6_SPICH
Tax=GWB1_Spirochaetes_48_6_curated
LAC_acetylene_scaffold_39542_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(7121..7630)
DNA (510bp) protein (170aa)
Rod shape-determining protein MreD n=1 Tax=Treponema phagedenis F0421 RepID=E7NVF3_TREPH
rod shape-determining protein MreD
Tax=RBG_16_Spirochaete_67_19_curated
LAC_acetylene_scaffold_39542_7
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(7627..8523)
DNA (897bp) protein (299aa)
Cell shape-determining protein MreC n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3F8_SPICH
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Flags: Precursor;; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_39542_8
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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comp(8535..9581)
DNA (1047bp) protein (349aa)
Cell shape determining protein, MreB/Mrl family id=1276006 bin=GWE1_Spirochaete_60_18 species=unknown genus=unknown taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
cell shape determining protein, MreB/Mrl family
Tax=GWB1_Spirochaetes_60_80_curated
LAC_acetylene_scaffold_39542_9
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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comp(9588..10562)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003722A54
hypothetical protein
Tax=GWB1_Spirochaetes_48_6_curated
LAC_acetylene_scaffold_39542_10
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(11155..12087)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3G1_SPICH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ19537.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
LAC_acetylene_scaffold_39542_11
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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comp(12103..13827)
DNA (1725bp) protein (575aa)
RNA polymerase sigma factor id=2426997 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=GWB1_Spirochaetes_48_6_curated
LAC_acetylene_scaffold_39542_12
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13820..14548)
DNA (729bp) protein (243aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
DNA primase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3G3_SPICH
DNA primase
Displaying 12 items

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