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anamox4_curated_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 1499 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_0_1
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..635
DNA (633bp) protein (211aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
Superoxide dismutase Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RM31_ASTEC
manganese/iron superoxide dismutase-like protein
anamox4_curated_scaffold_0_2
Bacillus thermotolerans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(725..1021)
DNA (297bp) protein (99aa)
hypothetical protein Tax=Streptomyces sp. MspMP-M5 RepID=UPI000364C2EA
YciL protein {ECO:0000313|EMBL:KKB33082.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermotolerans.;"
YCII-related
anamox4_curated_scaffold_0_3
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1027..1833)
DNA (807bp) protein (269aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KN93_MICAA
enoyl-ACP reductase
anamox4_curated_scaffold_0_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1872..3092)
DNA (1221bp) protein (407aa)
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:KGM34783.1}; EC=2.3.1.41 {ECO:0000313|EMBL:KGM34783.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
fabB; beta-ketoacyl-ACP synthase I (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase I Tax=Cellvibrio sp. BR RepID=I3I6D3_9GAMM
anamox4_curated_scaffold_0_5
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3200..3757)
DNA (558bp) protein (186aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC:4.2.1.59)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase Tax=Micavibrio aeruginosavorus EPB RepID=M4VHB7_9PROT
anamox4_curated_scaffold_0_6
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3814..4761)
DNA (948bp) protein (316aa)
Putative uncharacterized protein Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KN89_MICAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP09422.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
anamox4_curated_scaffold_0_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4768..5382)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TRK0_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK55388.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
anamox4_curated_scaffold_0_8
Shewanella sp. HN-41, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5602..6642
DNA (1041bp) protein (347aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. HN-41.;"
tRNA-dihydrouridine synthase Tax=Shewanella sp. HN-41 RepID=F7RRS5_9GAMM
tRNA-dihydrouridine synthase A
anamox4_curated_scaffold_0_9
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6776..7402
DNA (627bp) protein (209aa)
Putative uncharacterized protein Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KN86_MICAA
hypothetical protein
Tax=CG_Alphaprot_01
anamox4_curated_scaffold_0_10
unknown

Not on your lists

7459..7974
DNA (516bp) protein (172aa)

This feature has no annotations

anamox4_curated_scaffold_0_11
unknown

Not on your lists

7987..8148
DNA (162bp) protein (54aa)

This feature has no annotations

anamox4_curated_scaffold_0_12
unknown

Not on your lists

8473..8625
DNA (153bp) protein (51aa)

This feature has no annotations

anamox4_curated_scaffold_0_13
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

8740..9420
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Strongylocentrotus purpuratus RepID=H3IWX7_STRPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_026976-tr}; species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
anamox4_curated_scaffold_0_14
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

9440..10120
DNA (681bp) protein (227aa)
Ankyrin repeat protein, putative Tax=Trichomonas vaginalis RepID=A2FJ12_TRIVA
Ankyrin repeat protein, putative {ECO:0000313|EMBL:EAX95127.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
ankyrin
anamox4_curated_scaffold_0_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10127..11314
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Ochrobactrum sp. CDB2 RepID=M3KE49_9RHIZ
Membrane protein {ECO:0000313|EMBL:KGM32646.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
flavo, family protein
anamox4_curated_scaffold_0_16
unknown

Not on your lists

comp(11362..11652)
DNA (291bp) protein (97aa)

This feature has no annotations

anamox4_curated_scaffold_0_17
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11792..12130)
DNA (339bp) protein (113aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003817F92
Uncharacterized protein {ECO:0000313|EMBL:EDP63143.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
anamox4_curated_scaffold_0_18
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12168..12575)
DNA (408bp) protein (136aa)
Putative uncharacterized protein Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KN82_MICAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP09415.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
anamox4_curated_scaffold_0_19
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12572..13843)
DNA (1272bp) protein (424aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7)
Cysteine desulfurase Tax=Caulobacter crescentus OR37 RepID=R0EPI4_CAUCE
anamox4_curated_scaffold_0_20
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13843..15162)
DNA (1320bp) protein (440aa)
FeS assembly protein SufD Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IR42_RHOCS
sufD; FeS assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:ACI97928.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
anamox4_curated_scaffold_0_21
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15165..15914)
DNA (750bp) protein (250aa)
ABC transporter involved in Fe-S cluster assembly SufC, ATP-binding protein Tax=Azospirillum brasilense Sp245 RepID=G8AQB9_AZOBR
sufC; cysteine desulfurase
Cysteine desulfurase {ECO:0000313|EMBL:AIB13652.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
anamox4_curated_scaffold_0_22
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15914..17365)
DNA (1452bp) protein (484aa)
Iron-sulfur cluster assembly protein SufB Tax=Micavibrio aeruginosavorus EPB RepID=M4VF63_9PROT
Iron-sulfur cluster assembly protein SufB
Iron-sulfur cluster assembly protein SufB {ECO:0000313|EMBL:AGH97863.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
anamox4_curated_scaffold_0_23
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17349..17816)
DNA (468bp) protein (156aa)
Rrf2 family transcriptional regulator Tax=Fodinicurvata sediminis RepID=UPI0003B74C5F
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EWY37895.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
rrf2 family transcriptional regulator
anamox4_curated_scaffold_0_24
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18074..19798)
DNA (1725bp) protein (575aa)
Peptide chain release factor 3 Tax=Rhodospirillum rubrum RepID=G2TG35_RHORU
peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
anamox4_curated_scaffold_0_25
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19814..20506
DNA (693bp) protein (231aa)
Pseudouridine synthase Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQ35_TISMK
ribosomal large subunit pseudouridine synthase D
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:AFK54873.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
anamox4_curated_scaffold_0_26
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20519..21919)
DNA (1401bp) protein (467aa)
aldehyde dehydrogenase Tax=Thalassospira lucentensis RepID=UPI0003B7626B
Aldehyde dehydrogenase {ECO:0000313|EMBL:KEO59130.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
aldehyde dehydrogenase
anamox4_curated_scaffold_0_27
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22557..23213
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C5Y6_HYPNA
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
anamox4_curated_scaffold_0_28
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23225..23593
DNA (369bp) protein (123aa)
Conserved domain protein Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C5Y7_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KCZ98489.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
hypothetical protein
anamox4_curated_scaffold_0_29
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23590..23979
DNA (390bp) protein (130aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003797D8F
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
anamox4_curated_scaffold_0_30
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24064..24549)
DNA (486bp) protein (162aa)
TspO and MBR like protein Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0E019_THIND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE97724.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
Displaying items 1-30 of 1499 in total

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