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anamox4_curated_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 145 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_43_1
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

3..395
DNA (393bp) protein (131aa)
hypothetical protein, partial Tax=Kribbella catacumbae RepID=UPI0003800278
transposase (mutator type)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
anamox4_curated_scaffold_43_2
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(542..1846)
DNA (1305bp) protein (435aa)
Sulfatase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TB1_SOLUE
sulfatase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
anamox4_curated_scaffold_43_3
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(1918..3912)
DNA (1995bp) protein (665aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6ABI3_9PROT
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
anamox4_curated_scaffold_43_4
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

4036..4929
DNA (894bp) protein (298aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YC83_THIV6
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
anamox4_curated_scaffold_43_5

Not on your lists

comp(5413..6156)
DNA (744bp) protein (248aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI000365D39F
Marine sediment metagenome DNA, contig: S01H1_L04172 {ECO:0000313|EMBL:GAF81769.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
short-chain dehydrogenase/reductase SDR
anamox4_curated_scaffold_43_6
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6182..6772)
DNA (591bp) protein (197aa)
Acetyltransferase, GNAT family Tax=Synechococcus sp. PCC 7335 RepID=B4WS94_9SYNE
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDX84346.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
N-acetyltransferase GCN5
anamox4_curated_scaffold_43_7
Enterococcus moraviensis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6812..6937)
DNA (126bp) protein (42aa)
Uncharacterized protein Tax=Enterococcus moraviensis ATCC BAA-383 RepID=R2QIQ3_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH96477.1}; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus moraviensis ATCC BAA-383.;"
hypothetical protein
anamox4_curated_scaffold_43_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7044..9467)
DNA (2424bp) protein (808aa)
Putative phytochrome sensor protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phytochrome sensor protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
anamox4_curated_scaffold_43_9
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(9696..10478)
DNA (783bp) protein (261aa)
Phosphomethylpyrimidine kinase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUK7_ROSS1
phosphomethylpyrimidine kinase
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:ABQ90310.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
anamox4_curated_scaffold_43_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10490..11674)
DNA (1185bp) protein (395aa)
Putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE16_CHLTF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
anamox4_curated_scaffold_43_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11671..12840)
DNA (1170bp) protein (390aa)
Histidine kinase,Response regulator receiver domain protein,histidine kinase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMV6_SINAD
histidine kinase
Histidine kinase,Response regulator receiver domain protein,histidine kinase {ECO:0000313|EMBL:AGA30714.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
anamox4_curated_scaffold_43_12
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12956..15565
DNA (2610bp) protein (870aa)
Peptidoglycan transglycosylase and transpeptidase MrcA Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8L9_PELCD
mrcA; peptidoglycan transglycosylase and transpeptidase MrcA
Peptidoglycan transglycosylase and transpeptidase MrcA {ECO:0000313|EMBL:ABA87273.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
anamox4_curated_scaffold_43_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15593..16618)
DNA (1026bp) protein (342aa)
histone deacetylase family protein bin=RBG_16_Aminicenantes_63_14 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
histone deacetylase superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
anamox4_curated_scaffold_43_14
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

16729..17052
DNA (324bp) protein (108aa)
Sec-independent protein translocase protein TatA Tax=Geobacter sulfurreducens RepID=D7ALV8_GEOSK
tatB; twin-arginine translocation pathway protein TatB
Tax=RBG_16_Acidobacteria_68_9_curated
anamox4_curated_scaffold_43_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17095..17871
DNA (777bp) protein (259aa)
Sec-independent protein translocase, TatC subunit bin=GWD2_Deltaproteobacteria_55_8 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Sec-independent protein translocase subunit TatC
Tax=GWD2_Deltaproteobacteria_55_8_curated
anamox4_curated_scaffold_43_16
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

17889..18923
DNA (1035bp) protein (345aa)
Alcohol dehydrogenase bin=GWA1_Deltaproteobacteria_52_35 species=Oxalobacter formigenes genus=Oxalobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
NADP-dependent alcohol dehydrogenase
Tax=GWA1_Bdellovibrionales_52_35_curated
anamox4_curated_scaffold_43_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18901..19155)
DNA (255bp) protein (85aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
anamox4_curated_scaffold_43_18
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19152..21194)
DNA (2043bp) protein (681aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
anamox4_curated_scaffold_43_19
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21277..22032)
DNA (756bp) protein (252aa)
Hydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hydrolase
Tax=GWD2_Deltaproteobacteria_55_8_curated
anamox4_curated_scaffold_43_20
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22132..23037
DNA (906bp) protein (302aa)
Tyrosine recombinase XerC bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
xerC; site-specific recombinase XerC
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
anamox4_curated_scaffold_43_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23107..23970
DNA (864bp) protein (288aa)
Short-chain dehydrogenase/reductase SDR Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VDR7_CAUST
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
anamox4_curated_scaffold_43_22
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24032..24793)
DNA (762bp) protein (254aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
Methyltransferase Tax=Methylocystis sp. (strain SC2) RepID=J7QRY5_METSZ
methyltransferase
anamox4_curated_scaffold_43_23
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24936..25478
DNA (543bp) protein (181aa)
ATP-dependent protease subunit HslV bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ATP-dependent protease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
anamox4_curated_scaffold_43_24
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25475..26845
DNA (1371bp) protein (457aa)
ATP-dependent protease ATPase subunit HslU bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
anamox4_curated_scaffold_43_25
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26901..27797
DNA (897bp) protein (299aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
anamox4_curated_scaffold_43_26
unknown

Not on your lists

comp(27819..28835)
DNA (1017bp) protein (339aa)

This feature has no annotations

anamox4_curated_scaffold_43_27
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28832..30820)
DNA (1989bp) protein (663aa)
asnB; asparagine synthase (EC:6.3.5.4)
Asparagine synthase {ECO:0000313|EMBL:AJW94289.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AJW94289.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
Asparagine synthetase Tax=Sorangium cellulosum (strain So ce56) RepID=A9GJ27_SORC5
anamox4_curated_scaffold_43_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30830..31750)
DNA (921bp) protein (307aa)
fabD1; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CAN93345.1}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CAN93345.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Malonyl CoA-acyl carrier protein transacylase Tax=Sorangium cellulosum (strain So ce56) RepID=A9GJ23_SORC5
anamox4_curated_scaffold_43_29
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(31769..32806)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein bin=GWA2_OP3_52_12 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
ATP-utilizing enzyme of the PP-loop superfamily
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
anamox4_curated_scaffold_43_30
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32803..33051)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0E6_9PROT
phosphopantetheine attachment site family protein
Phosphopantetheine attachment site family protein {ECO:0000313|EMBL:KGC14135.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
Displaying items 1-30 of 145 in total

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