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anamox4_curated_scaffold_1358

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_1358_1
unknown

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2..331
DNA (330bp) protein (110aa)

This feature has no annotations

anamox4_curated_scaffold_1358_2

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515..1876
DNA (1362bp) protein (454aa)
resolvase domain-containing protein bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=RAAC11 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:KKS35072.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_12.;"
resolvase
anamox4_curated_scaffold_1358_trna_1
unknown

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comp(1838..1910)
DNA (73bp)
transferRNA Asn
anamox4_curated_scaffold_1358_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1974..2297)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBX0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40729.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_1358_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(2329..2607)
DNA (279bp) protein (93aa)
porE; pyruvate:ferredoxin oxidoreductase epsilon subunit (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase epsilon subunit {ECO:0000313|EMBL:CBK40730.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CBK40730.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Pyruvate:ferredoxin oxidoreductase epsilon subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBX1_9BACT
anamox4_curated_scaffold_1358_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2632..3339)
DNA (708bp) protein (236aa)
porC; pyruvate:ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase gamma subunit {ECO:0000313|EMBL:CBK40731.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CBK40731.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Pyruvate:ferredoxin oxidoreductase gamma subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBX2_9BACT
anamox4_curated_scaffold_1358_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3357..4259)
DNA (903bp) protein (301aa)
porB; pyruvate:ferredoxin oxidoreductase subunit beta (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CBK40732.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CBK40732.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Pyruvate:ferredoxin oxidoreductase beta subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBX3_9BACT
anamox4_curated_scaffold_1358_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4319..5530)
DNA (1212bp) protein (404aa)
porA; pyruvate:ferredoxin oxidoreductase subunit alpha (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CBK40733.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CBK40733.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Pyruvate:ferredoxin oxidoreductase alpha subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBX4_9BACT
anamox4_curated_scaffold_1358_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5571..6206)
DNA (636bp) protein (212aa)
porD; pyruvate:ferredoxin oxidoreductase subunit delta (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase delta subunit {ECO:0000313|EMBL:CBK40734.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CBK40734.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Pyruvate:ferredoxin oxidoreductase delta subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBX5_9BACT
anamox4_curated_scaffold_1358_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(6521..6805)
DNA (285bp) protein (95aa)
YciI-like protein Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE04
yciI_[H]; YciL protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
anamox4_curated_scaffold_1358_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6832..7245)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBX7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40736.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_1358_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7662..8933
DNA (1272bp) protein (424aa)
rho; transcription termination factor Rho (EC:3.6.1.-)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CBK40737.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Transcription termination factor Rho Tax=Candidatus Nitrospira defluvii RepID=D8PBX8_9BACT
anamox4_curated_scaffold_1358_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


9031..9237
DNA (207bp) protein (69aa)
50S ribosomal protein L31 Tax=Candidatus Nitrospira defluvii RepID=D8PBX9_9BACT
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_1358_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9330..10409
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY0_9BACT
prfA; peptide chain release factor RF-1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_1358_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10406..11338
DNA (933bp) protein (311aa)
hemK; protein-(glutamine-N5) methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Release factor glutamine methyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PBY1_9BACT
anamox4_curated_scaffold_1358_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

11310..12605
DNA (1296bp) protein (432aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PBY2_9BACT
anamox4_curated_scaffold_1358_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12610..13224
DNA (615bp) protein (205aa)
hisG; ATP-phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ATP phosphoribosyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PBY3_9BACT
Displaying 17 items

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