ggKbase home page

anamox4_curated_scaffold_476

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_476_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3..2162
DNA (2160bp) protein (720aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIV0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43187.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2176..2889)
DNA (714bp) protein (238aa)
putative phosphoesterase (EC:3.1.3.-)
Putative Phosphoesterase, PAP2 superfamily {ECO:0000313|EMBL:CBK43352.1}; EC=3.1.3.- {ECO:0000313|EMBL:CBK43352.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Phosphoesterase, PAP2 superfamily Tax=Candidatus Nitrospira defluvii RepID=D8P7K6_9BACT
anamox4_curated_scaffold_476_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2999..4249)
DNA (1251bp) protein (417aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXD6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84869.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
anamox4_curated_scaffold_476_4
unknown

Not on your lists

4552..4677
DNA (126bp) protein (42aa)

This feature has no annotations

anamox4_curated_scaffold_476_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4674..5396)
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7K0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43346.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5462..5866)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7J9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43345.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_7
unknown

Not on your lists

6194..6382
DNA (189bp) protein (63aa)

This feature has no annotations

anamox4_curated_scaffold_476_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6476..6604)
DNA (129bp) protein (43aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7J7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43343.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6805..7719)
DNA (915bp) protein (305aa)
Putative AEC-type transporter Tax=Candidatus Nitrospira defluvii RepID=D8P7J6_9BACT
putative AEC-type transporter
Putative AEC-type transporter {ECO:0000313|EMBL:CBK43342.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7788..9029
DNA (1242bp) protein (414aa)
Tetracycline efflux transporter Tax=Candidatus Nitrospira defluvii RepID=D8P7J5_9BACT
tetA; tetracycline efflux transporter
Tetracycline efflux transporter {ECO:0000313|EMBL:CBK43341.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9031..10011)
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7J4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43340.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

10176..11189
DNA (1014bp) protein (338aa)
o-methyltransferase (EC:2.1.1.-)
O-methyltransferase, family 2 Tax=Candidatus Nitrospira defluvii RepID=D8PJ97_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
anamox4_curated_scaffold_476_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11202..11465)
DNA (264bp) protein (88aa)
Putative Endonuclease Tax=Candidatus Nitrospira defluvii RepID=D8P7I8_9BACT
putative endonuclease
Putative Endonuclease {ECO:0000313|EMBL:CBK43334.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_14
unknown

Not on your lists

comp(11584..11742)
DNA (159bp) protein (53aa)

This feature has no annotations

anamox4_curated_scaffold_476_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11864..12352
DNA (489bp) protein (163aa)
gluconate kinase Tax=Gemmata obscuriglobus RepID=UPI00016C41EB
carbohydrate kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
anamox4_curated_scaffold_476_16
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12378..13763)
DNA (1386bp) protein (462aa)
Putative phytochrome sensor protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UL86_ANASK
GAF domain protein {ECO:0000313|EMBL:GAO03152.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
phytochrome sensor protein
anamox4_curated_scaffold_476_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13767..14225)
DNA (459bp) protein (153aa)
Putative uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IE07_ANADE
Uncharacterized protein {ECO:0000313|EMBL:AKF09996.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
anamox4_curated_scaffold_476_18
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14391..15239
DNA (849bp) protein (283aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EJW3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84975.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
anamox4_curated_scaffold_476_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15335..15724
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7I3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43329.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(15728..16492)
DNA (765bp) protein (255aa)
Putative Diheme cytochrome c Tax=Candidatus Nitrospira defluvii RepID=D8P7I2_9BACT
putative diheme cytochrome c
Putative Diheme cytochrome c {ECO:0000313|EMBL:CBK43328.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(16634..17188)
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7H8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43324.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_22
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17355..18041
DNA (687bp) protein (229aa)
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000313|EMBL:CBK43321.1}; EC=3.6.1.1 {ECO:0000313|EMBL:CBK43321.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Inorganic pyrophosphatase Tax=Candidatus Nitrospira defluvii RepID=D8P7H5_9BACT
anamox4_curated_scaffold_476_23
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

18014..19798
DNA (1785bp) protein (595aa)
deaD; DEAd-box RNA helicase (EC:3.6.1.-)
DEAD-box RNA helicase {ECO:0000313|EMBL:CBK43320.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK43320.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
DEAD-box RNA helicase Tax=Candidatus Nitrospira defluvii RepID=D8P7H4_9BACT
anamox4_curated_scaffold_476_24
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19837..20397)
DNA (561bp) protein (187aa)
OsmC family protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7TZI1_DESML
Osmotically inducible protein C {ECO:0000313|EMBL:EWT00170.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
OsmC family protein
anamox4_curated_scaffold_476_25

Not on your lists

comp(20481..20915)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEI0_METPP
Uncharacterized protein {ECO:0000313|EMBL:KKL22576.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
anamox4_curated_scaffold_476_26
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21116..23056)
DNA (1941bp) protein (647aa)
Sigma54 specific transcriptional regulator, Fis family Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI74_ANADF
sigma-54 dependent trancsriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS28420.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
anamox4_curated_scaffold_476_27
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

23341..24924
DNA (1584bp) protein (528aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ81_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43318.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_28
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(24927..25103)
DNA (177bp) protein (59aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ79_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43316.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_29
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(25144..26769)
DNA (1626bp) protein (542aa)
Peptide chain release factor 3 Tax=Candidatus Nitrospira defluvii RepID=D8PJ77_9BACT
prfC; peptide chain release factor RF-3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_476_30
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26901..29174
DNA (2274bp) protein (758aa)
Mechanosensitive ion channel family protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q607X1_METCA
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:AAU92359.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Displaying items 1-30 of 44 in total

View Taxonomy