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anamox4_curated_scaffold_253

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Displaying items 31-60 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_253_31
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

31303..32004
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC82_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40841.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_32
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

32174..33400
DNA (1227bp) protein (409aa)
Efflux transporter, RND family, MFP subunit, putative Macrolide-specific efflux protein Tax=Candidatus Nitrospira defluvii RepID=D8PC83_9BACT
macA; putative macrolide-specific efflux protein
Efflux transporter, RND family, MFP subunit, putative Macrolide-specific efflux protein {ECO:0000313|EMBL:CBK40842.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_33
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

33416..34180
DNA (765bp) protein (255aa)
macB; putative macrolide ABC transporter ATPase (EC:3.6.3.-)
ABC transporter, ATPase component, putative Macrolide export ATP-binding protein {ECO:0000313|EMBL:CBK40843.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBK40843.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ABC transporter, ATPase component, putative Macrolide export ATP-binding protein Tax=Candidatus Nitrospira defluvii RepID=D8PC84_9BACT
anamox4_curated_scaffold_253_34
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

34189..35424
DNA (1236bp) protein (412aa)
ABC transporter, permease component, putative Macrolide export permease protein Tax=Candidatus Nitrospira defluvii RepID=D8PC85_9BACT
macC; putative macrolide ABC transporter permease
ABC transporter, permease component, putative Macrolide export permease protein {ECO:0000313|EMBL:CBK40844.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_35
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(35465..36706)
DNA (1242bp) protein (414aa)
Putative Metal dependent phosphohydrolase Tax=Candidatus Nitrospira defluvii RepID=D8PC86_9BACT
putative metal dependent phosphohydrolase
Putative Metal dependent phosphohydrolase {ECO:0000313|EMBL:CBK40845.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_36
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(36752..37300)
DNA (549bp) protein (183aa)
putative crossover junction endodeoxyribonuclease RusA (EC:3.1.22.4)
Putative Crossover junction endodeoxyribonuclease RusA {ECO:0000313|EMBL:CBK40846.1}; EC=3.1.22.4 {ECO:0000313|EMBL:CBK40846.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Crossover junction endodeoxyribonuclease RusA Tax=Candidatus Nitrospira defluvii RepID=D8PC87_9BACT
anamox4_curated_scaffold_253_37
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(37409..37849)
DNA (441bp) protein (147aa)
Protein MraZ Tax=Candidatus Nitrospira defluvii RepID=D8PC88_9BACT
hypothetical protein
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_38
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(37866..38063)
DNA (198bp) protein (66aa)
ptsN; PTS family fructose/mannitol (fru) porter component IIA; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
excisionase family DNA binding domain-containing protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
anamox4_curated_scaffold_253_39
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(38178..38522)
DNA (345bp) protein (115aa)
Putative Regulatory protein, FmdB family Tax=Candidatus Nitrospira defluvii RepID=D8PC89_9BACT
putative FmdB family regulatory protein
Putative Regulatory protein, FmdB family {ECO:0000313|EMBL:CBK40848.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_40
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(38525..39328)
DNA (804bp) protein (268aa)
putative phosphoribosyltransferase (EC:2.4.2.-)
Putative Phosphoribosyltransferase {ECO:0000313|EMBL:CBK40849.1}; EC=2.4.2.- {ECO:0000313|EMBL:CBK40849.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Phosphoribosyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PC90_9BACT
anamox4_curated_scaffold_253_41
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

39426..40175
DNA (750bp) protein (250aa)
putative lipoprotein-releasing system protein LolD (EC:3.6.3.-)
ABC transporter, ATP-binding component, putative Lipoprotein-releasing system protein LolD {ECO:0000313|EMBL:CBK40850.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBK40850.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ABC transporter, ATP-binding component, putative Lipoprotein-releasing system protein LolD Tax=Candidatus Nitrospira defluvii RepID=D8PC91_9BACT
anamox4_curated_scaffold_253_42
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

40145..41071
DNA (927bp) protein (309aa)
pyrD; dihydroorotate dehydrogenase (EC:1.3.3.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224, ECO:0000313|EMBL:CBK40851.1}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Dihydroorotate dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8PC92_9BACT
anamox4_curated_scaffold_253_43
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(41100..41435)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC93_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40852.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_44
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

41758..44178
DNA (2421bp) protein (807aa)
Putative ABC transporter, permease component Tax=Candidatus Nitrospira defluvii RepID=D8PC94_9BACT
Putative ABC transporter, permease component {ECO:0000313|EMBL:CBK40853.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
putative ABC transporter permease
anamox4_curated_scaffold_253_45
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(44169..45203)
DNA (1035bp) protein (345aa)
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Biotin synthase Tax=Candidatus Nitrospira defluvii RepID=D8PC95_9BACT
anamox4_curated_scaffold_253_46
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(45300..46700)
DNA (1401bp) protein (467aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC96_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40855.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_47
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(46702..47073)
DNA (372bp) protein (124aa)
Ribosomal silencing factor RsfS Tax=Candidatus Nitrospira defluvii RepID=D8PC97_9BACT
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_48
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(47099..47791)
DNA (693bp) protein (231aa)
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244, ECO:0000313|EMBL:CBK40857.1};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Probable nicotinate-nucleotide adenylyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PC98_9BACT
anamox4_curated_scaffold_253_49
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(47807..48928)
DNA (1122bp) protein (374aa)
proB; glutamat 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Glutamate 5-kinase Tax=Candidatus Nitrospira defluvii RepID=D8PC99_9BACT
anamox4_curated_scaffold_253_50
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(48910..49941)
DNA (1032bp) protein (344aa)
GTPase Obg Tax=Candidatus Nitrospira defluvii RepID=D8PCA0_9BACT
obgE; GTPase involved in DNA replication and ribosome assembly
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_51
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(50068..50331)
DNA (264bp) protein (88aa)
50S ribosomal protein L27 Tax=Candidatus Nitrospira defluvii RepID=D8PCA1_9BACT
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539, ECO:0000313|EMBL:CBK40860.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_52
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(50353..50667)
DNA (315bp) protein (105aa)
50S ribosomal protein L21 Tax=Candidatus Nitrospira defluvii RepID=D8PCA2_9BACT
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_53
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

50802..51716
DNA (915bp) protein (305aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CBK40862.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CBK40862.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Branched-chain amino acid aminotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PCA3_9BACT
anamox4_curated_scaffold_253_54
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(51837..52193)
DNA (357bp) protein (119aa)
Preprotein translocase, membrane subunit SecG Tax=Candidatus Nitrospira defluvii RepID=D8PCA4_9BACT
secG; preprotein translocase, membrane subunit SecG
Preprotein translocase, membrane subunit SecG {ECO:0000313|EMBL:CBK40863.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_253_55
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(52204..52737)
DNA (534bp) protein (178aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Triosephosphate isomerase Tax=Candidatus Nitrospira defluvii RepID=D8PCA5_9BACT
anamox4_curated_scaffold_253_56
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(52959..54158)
DNA (1200bp) protein (400aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Phosphoglycerate kinase Tax=Candidatus Nitrospira defluvii RepID=D8PCA6_9BACT
anamox4_curated_scaffold_253_57
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(54236..55243)
DNA (1008bp) protein (336aa)
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160, ECO:0000313|EMBL:CBK40866.1}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Glyceraldehyde-3-phosphate dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8PCA7_9BACT
anamox4_curated_scaffold_253_58
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

55432..57861
DNA (2430bp) protein (810aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Endonuclease MutS2 Tax=Candidatus Nitrospira defluvii RepID=D8PCA8_9BACT
mutS2; MutS2 family protein
anamox4_curated_scaffold_253_59
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

58053..60350
DNA (2298bp) protein (766aa)
putative sensor histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK40868.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Sensor histidine kinase Tax=Candidatus Nitrospira defluvii RepID=D8PCA9_9BACT
anamox4_curated_scaffold_253_60
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

60332..60976
DNA (645bp) protein (215aa)
Response regulator, LuxR family Tax=Candidatus Nitrospira defluvii RepID=D8PCB0_9BACT
LuxR family response regulator
Response regulator, LuxR family {ECO:0000313|EMBL:CBK40869.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying items 31-60 of 86 in total

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