ggKbase home page

anamox4_curated_scaffold_253_38

Organism: anamox4_Candidatus_Nitrospira_defluvii_60_9_curated

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(37866..38063)

Top 3 Functional Annotations

Value Algorithm Source
ptsN; PTS family fructose/mannitol (fru) porter component IIA; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 56.0
  • Bit_score: 68
  • Evalue 1.40e-09
excisionase family DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 54.0
  • Bit_score: 65
  • Evalue 4.50e-09
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 65.0
  • Bit_score: 95
  • Evalue 1.50e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Nitrospirae_58_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 198
ATGACCACCGACCACAAGAACGAGCTGCTCACGGTGGCGGAAACCTGCCGTTATCTGAAGATCAGCCCCCGTACGCTCTATCGCTATATTCAGGAGCGCCAACTCCCCGGTTTCAAGCTGGGAAAGGAGTGGCGGTTCGCACGGACCGATTTGGAGCGATGGCTCCGCGAACGGATGGGGCCGCCCTCGCAGCCATGA
PROTEIN sequence
Length: 66
MTTDHKNELLTVAETCRYLKISPRTLYRYIQERQLPGFKLGKEWRFARTDLERWLRERMGPPSQP*