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anamox4_curated_scaffold_1980

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_1980_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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3..392
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PHZ4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42881.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_1980_2

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665..961
DNA (297bp) protein (99aa)
RNA-binding protein Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VX13_9BACT
RNA-binding protein {ECO:0000313|EMBL:AGC72159.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_560.;"
putative RNA-binding protein RbpA
anamox4_curated_scaffold_1980_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1108..2463
DNA (1356bp) protein (452aa)
rhlE; ATP-dependent RNA helicase (EC:3.6.1.-)
ATP-dependent RNA helicase {ECO:0000313|EMBL:CBK42878.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK42878.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ATP-dependent RNA helicase Tax=Candidatus Nitrospira defluvii RepID=D8PHZ1_9BACT
anamox4_curated_scaffold_1980_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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2522..3055
DNA (534bp) protein (178aa)
putative FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBK42877.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Peptidyl-prolyl cis-trans isomerase Tax=Candidatus Nitrospira defluvii RepID=D8PHZ0_9BACT
anamox4_curated_scaffold_1980_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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3175..3876
DNA (702bp) protein (234aa)
ung; uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Uracil-DNA glycosylase Tax=Candidatus Nitrospira defluvii RepID=B3U4N1_9BACT
anamox4_curated_scaffold_1980_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4005..4799
DNA (795bp) protein (265aa)
cah; carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000313|EMBL:ACE75599.1}; EC=4.2.1.1 {ECO:0000313|EMBL:ACE75599.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Carbonic anhydrase Tax=Candidatus Nitrospira defluvii RepID=B3U4N2_9BACT
anamox4_curated_scaffold_1980_7
unknown

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5183..5326
DNA (144bp) protein (48aa)

This feature has no annotations

anamox4_curated_scaffold_1980_8
RBG_16_OP11_Gottesmanbacteria_52_11_curated, Gottesmanbacteria, Microgenomates, Bacteria

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5419..5715
DNA (297bp) protein (99aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375D5C2
hypothetical protein
Tax=RBG_16_OP11_Gottesmanbacteria_52_11_curated
anamox4_curated_scaffold_1980_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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5916..6083
DNA (168bp) protein (56aa)
Exported protein Tax=Candidatus Nitrospira defluvii RepID=B3U4N7_9BACT
hypothetical protein
Exported protein {ECO:0000313|EMBL:ACE75604.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41197.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_1980_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6159..6401
DNA (243bp) protein (81aa)
Putative stress response protein Tax=Candidatus Nitrospira defluvii RepID=B3U4P7_9BACT
yjbJ; hypothetical protein
Putative stress response protein {ECO:0000313|EMBL:ACE75614.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41209.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_1980_11
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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6398..6817
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=B3U4P8_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
anamox4_curated_scaffold_1980_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6847..8478)
DNA (1632bp) protein (544aa)
Exported protein Tax=Candidatus Nitrospira defluvii RepID=B3U4P9_9BACT
hypothetical protein
Exported protein {ECO:0000313|EMBL:ACE75616.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41211.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_1980_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8710..9453
DNA (744bp) protein (248aa)
Exported protein Tax=Candidatus Nitrospira defluvii RepID=B3U4Q0_9BACT
hypothetical protein
Exported protein {ECO:0000313|EMBL:ACE75617.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41212.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 13 items

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