ggKbase home page

anamox4_curated_scaffold_934

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_934_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1..750)
DNA (750bp) protein (250aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Phosphoglucosamine mutase Tax=Candidatus Nitrospira defluvii RepID=D8PGQ4_9BACT
anamox4_curated_scaffold_934_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(743..1621)
DNA (879bp) protein (293aa)
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CBK42442.1}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CBK42442.1};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Dihydropteroate synthase Tax=Candidatus Nitrospira defluvii RepID=D8PGQ5_9BACT
anamox4_curated_scaffold_934_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1823..3637)
DNA (1815bp) protein (605aa)
hflB; cell division protease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CBK42443.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ATP-dependent zinc metalloprotease FtsH Tax=Candidatus Nitrospira defluvii RepID=D8PGQ6_9BACT
anamox4_curated_scaffold_934_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3726..4277)
DNA (552bp) protein (184aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CBK42444.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CBK42444.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Hypoxanthine phosphoribosyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PGQ7_9BACT
anamox4_curated_scaffold_934_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4280..5734)
DNA (1455bp) protein (485aa)
tilS; tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000313|EMBL:CBK42445.1}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
tRNA(Ile)-lysidine synthase Tax=Candidatus Nitrospira defluvii RepID=D8PGQ8_9BACT
anamox4_curated_scaffold_934_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5734..6702)
DNA (969bp) protein (323aa)
ribF; riboflavin biosynthesis protein ribF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:CBK42446.1};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:CBK42446.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Riboflavin biosynthesis protein RibF Tax=Candidatus Nitrospira defluvii RepID=D8PGQ9_9BACT
anamox4_curated_scaffold_934_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6711..7682)
DNA (972bp) protein (324aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:CBK42447.1}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:CBK42447.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Delta-aminolevulinic acid dehydratase Tax=Candidatus Nitrospira defluvii RepID=D8PGR0_9BACT
anamox4_curated_scaffold_934_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7690..8082)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PGR1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42448.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_934_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(8133..9692)
DNA (1560bp) protein (520aa)
hemD; porphyrin biosynthesis protein HemD (EC:2.1.1.107 4.2.1.75)
Porphyrin biosynthesis protein HemD {ECO:0000313|EMBL:CBK42449.1}; EC=2.1.1.107 {ECO:0000313|EMBL:CBK42449.1};; EC=4.2.1.75 {ECO:0000313|EMBL:CBK42449.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Porphyrin biosynthesis protein HemD Tax=Candidatus Nitrospira defluvii RepID=D8PGR2_9BACT
anamox4_curated_scaffold_934_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9698..10630)
DNA (933bp) protein (311aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:CBK42450.1}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:CBK42450.1};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Porphobilinogen deaminase Tax=Candidatus Nitrospira defluvii RepID=D8PGR3_9BACT
anamox4_curated_scaffold_934_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10718..12124)
DNA (1407bp) protein (469aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Glutamyl-tRNA reductase Tax=Candidatus Nitrospira defluvii RepID=D8PGR4_9BACT
anamox4_curated_scaffold_934_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12126..12932)
DNA (807bp) protein (269aa)
Putative Cytochrome c biogenesis protein CcsA Tax=Candidatus Nitrospira defluvii RepID=D8PGR5_9BACT
putative cytochrome c biogenesis protein CcsA
Putative Cytochrome c biogenesis protein CcsA {ECO:0000313|EMBL:CBK42452.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_934_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12995..13723
DNA (729bp) protein (243aa)
putative methyltransferase (EC:2.1.1.-)
Putative Methyltransferase {ECO:0000313|EMBL:CBK42453.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK42453.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Methyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PGR6_9BACT
anamox4_curated_scaffold_934_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13747..14007)
DNA (261bp) protein (87aa)
putative sulfurtransferase TusA (EC:2.8.1.-)
Putative Sulfurtransferase TusA {ECO:0000313|EMBL:CBK42454.1}; EC=2.8.1.- {ECO:0000313|EMBL:CBK42454.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Sulfurtransferase TusA Tax=Candidatus Nitrospira defluvii RepID=D8PGR7_9BACT
anamox4_curated_scaffold_934_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14155..14934)
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PGR8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42455.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_934_trna_1
unknown

Not on your lists

comp(15191..15274)
DNA (84bp)
transferRNA Leu
anamox4_curated_scaffold_934_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15458..15739
DNA (282bp) protein (94aa)
Putative Fe(2+)-trafficking protein YggX Tax=Candidatus Nitrospira defluvii RepID=D8PGR9_9BACT
putative fe(2+)-trafficking protein YggX
Putative Fe(2+)-trafficking protein YggX {ECO:0000313|EMBL:CBK42456.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_934_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15872..16315
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PGS0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42457.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_934_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

16318..16803
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PGS1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42458.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_934_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


16851..17282
DNA (432bp) protein (144aa)
50S ribosomal protein L13 Tax=Candidatus Nitrospira defluvii RepID=D8PGS2_9BACT
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_934_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


17325..17717
DNA (393bp) protein (131aa)
30S ribosomal protein S9 Tax=Candidatus Nitrospira defluvii RepID=D8PGS3_9BACT
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_934_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17828..18430
DNA (603bp) protein (201aa)
argC; n-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
N-acetyl-gamma-glutamyl-phosphate reductase Tax=Candidatus Nitrospira defluvii RepID=D8PGS4_9BACT
Displaying 22 items

View Taxonomy