ggKbase home page

anamox4_curated_scaffold_467

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_467_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1..420)
DNA (420bp) protein (140aa)
bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834, ECO:0000313|EMBL:CBK42259.1};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PG72_9BACT
anamox4_curated_scaffold_467_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

502..2373
DNA (1872bp) protein (624aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Elongation factor 4 Tax=Candidatus Nitrospira defluvii RepID=D8PG73_9BACT
lepA; GTP-binding protein LepA
anamox4_curated_scaffold_467_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2370..3161
DNA (792bp) protein (264aa)
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993, ECO:0000313|EMBL:CBK42261.1}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993, ECO:0000313|EMBL:CBK42261.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Signal peptidase I Tax=Candidatus Nitrospira defluvii RepID=D8PG74_9BACT
anamox4_curated_scaffold_467_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3254..4183
DNA (930bp) protein (310aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-)
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE {ECO:0000313|EMBL:CBK42262.1}; EC=2.7.1.- {ECO:0000313|EMBL:CBK42262.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE Tax=Candidatus Nitrospira defluvii RepID=D8PG75_9BACT
anamox4_curated_scaffold_467_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4185..4955
DNA (771bp) protein (257aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
3-deoxy-manno-octulosonate cytidylyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PG76_9BACT
anamox4_curated_scaffold_467_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4987..6588
DNA (1602bp) protein (534aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase Tax=Candidatus Nitrospira defluvii RepID=D8PG77_9BACT
anamox4_curated_scaffold_467_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6633..7466
DNA (834bp) protein (278aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Candidatus Nitrospira defluvii RepID=D8PG78_9BACT
anamox4_curated_scaffold_467_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7433..8470
DNA (1038bp) protein (346aa)
kdsD; arabinose-5-phosphate isomerase (EC:5.3.1.13)
Arabinose-5-phosphate isomerase {ECO:0000313|EMBL:CBK42266.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CBK42266.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Arabinose-5-phosphate isomerase Tax=Candidatus Nitrospira defluvii RepID=D8PG79_9BACT
anamox4_curated_scaffold_467_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8505..9119
DNA (615bp) protein (205aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CBK42267.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CBK42267.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PG80_9BACT
anamox4_curated_scaffold_467_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9141..9743
DNA (603bp) protein (201aa)
Glycerol-3-phosphate acyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PG81_9BACT
plsY; hypothetical protein
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9773..10390
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PG82_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42269.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10470..11870
DNA (1401bp) protein (467aa)
degP3; serine protease do (EC:3.4.21.-)
Serine protease do {ECO:0000313|EMBL:CBK42270.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBK42270.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Serine protease do Tax=Candidatus Nitrospira defluvii RepID=D8PG83_9BACT
anamox4_curated_scaffold_467_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11911..14046)
DNA (2136bp) protein (712aa)
Elongation factor G (EF-G) Tax=Candidatus Nitrospira defluvii RepID=D8PG84_9BACT
fusA; elongation factor G
Elongation factor G (EF-G) {ECO:0000313|EMBL:CBK42271.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14104..14817)
DNA (714bp) protein (238aa)
DNA repair protein RadC homolog Tax=Candidatus Nitrospira defluvii RepID=D8PG85_9BACT
radC2; DNA repair protein RadC-like protein
DNA repair protein RadC homolog {ECO:0000313|EMBL:CBK42272.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15002..15175
DNA (174bp) protein (58aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PG86_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42273.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15618..16058
DNA (441bp) protein (147aa)
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52)
Putative Ribosomal RNA small subunit methyltransferase D {ECO:0000313|EMBL:CBK42274.1}; EC=2.1.1.52 {ECO:0000313|EMBL:CBK42274.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Ribosomal RNA small subunit methyltransferase D Tax=Candidatus Nitrospira defluvii RepID=D8PG87_9BACT
anamox4_curated_scaffold_467_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

16143..16553
DNA (411bp) protein (137aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Phosphopantetheine adenylyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PG88_9BACT
anamox4_curated_scaffold_467_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

16550..17743
DNA (1194bp) protein (398aa)
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:CBK42276.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CBK42276.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Aspartate aminotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PG89_9BACT
anamox4_curated_scaffold_467_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17886..18284
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PG90_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42277.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(18277..18744)
DNA (468bp) protein (156aa)
Putative Murein lipoprotein (Modular protein) Tax=Candidatus Nitrospira defluvii RepID=D8PG92_9BACT
putative murein lipoprotein
Putative Murein lipoprotein (Modular protein) {ECO:0000313|EMBL:CBK42279.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(18793..19440)
DNA (648bp) protein (216aa)
Putative dsRNA-binding protein, predicted ribosome maturation factor Tax=Candidatus Nitrospira defluvii RepID=D8PG93_9BACT
putative dsRNA-binding protein
Putative dsRNA-binding protein, predicted ribosome maturation factor {ECO:0000313|EMBL:CBK42280.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_22
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(19461..20738)
DNA (1278bp) protein (426aa)
purD; phosphoribosylamine-glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138, ECO:0000313|EMBL:CBK42281.1};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Phosphoribosylamine--glycine ligase Tax=Candidatus Nitrospira defluvii RepID=D8PG94_9BACT
anamox4_curated_scaffold_467_23
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(20812..22365)
DNA (1554bp) protein (518aa)
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH Tax=Candidatus Nitrospira defluvii RepID=D8PG95_9BACT
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_24
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

22654..23547
DNA (894bp) protein (298aa)
Putative Outer membrane protein, ompA family Tax=Candidatus Nitrospira defluvii RepID=D8PG96_9BACT
putative OmpA/MotB family outer membrane protein
Putative Outer membrane protein, ompA family {ECO:0000313|EMBL:CBK42283.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_25
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

23552..24793
DNA (1242bp) protein (414aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PG97_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42284.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_26
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24809..26935)
DNA (2127bp) protein (709aa)
Tetratricopeptide repeat domain protein Tax=Paenibacillus sp. P22 RepID=T2LSG2_9BACL
Uncharacterized protein {ECO:0000313|EMBL:ETT30038.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
hypothetical protein
anamox4_curated_scaffold_467_27
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(26985..28301)
DNA (1317bp) protein (439aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IKY3_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62378.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
anamox4_curated_scaffold_467_28
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28319..29926)
DNA (1608bp) protein (536aa)
Putative peptidase Tax=planctomycete KSU-1 RepID=I3IKY2_9PLAN
Putative peptidase {ECO:0000313|EMBL:GAB62377.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
peptidase S8/S53 subtilisin kexin sedolisin
anamox4_curated_scaffold_467_29
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(30264..31451)
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PG98_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42285.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_467_30
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(31481..33658)
DNA (2178bp) protein (726aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PGA1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42288.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 30 items

View Taxonomy