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anamox4_curated_scaffold_764

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox4_curated_scaffold_764_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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72..3041
DNA (2970bp) protein (990aa)
Putative NHL repeat protein Tax=Candidatus Nitrospira defluvii RepID=B3U4K9_9BACT
Putative NHL repeat protein {ECO:0000313|EMBL:ACE75576.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41169.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
anamox4_curated_scaffold_764_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3081..4547
DNA (1467bp) protein (489aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Inosine-5'-monophosphate dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=B3U4L0_9BACT
anamox4_curated_scaffold_764_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4640..6196
DNA (1557bp) protein (519aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
GMP synthase [glutamine-hydrolyzing] Tax=Candidatus Nitrospira defluvii RepID=B3U4L1_9BACT
anamox4_curated_scaffold_764_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6232..7221
DNA (990bp) protein (330aa)
rluB; 23S rRNA pseudouridylate synthase B (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Pseudouridine synthase Tax=Candidatus Nitrospira defluvii RepID=B3U4L2_9BACT
anamox4_curated_scaffold_764_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


7218..8981
DNA (1764bp) protein (588aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACE75581.1}; EC=6.1.1.12 {ECO:0000313|EMBL:ACE75581.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=B3U4L4_9BACT
anamox4_curated_scaffold_764_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8996..10096
DNA (1101bp) protein (367aa)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Chorismate synthase Tax=Candidatus Nitrospira defluvii RepID=B3U4L5_9BACT
anamox4_curated_scaffold_764_7
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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10116..10895
DNA (780bp) protein (260aa)
putative molybdenum ABC transporter ATPase (EC:3.6.3.-)
ABC transporter ATPase component Tax=Candidatus Nitrospira defluvii RepID=B3U4L7_9BACT
Tax=RBG_16_Gamma2_60_9_curated
anamox4_curated_scaffold_764_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10907..11866)
DNA (960bp) protein (320aa)
Putative Serine protease Tax=Candidatus Nitrospira defluvii RepID=B3U4L8_9BACT
putative serine protease
Putative Serine protease {ECO:0000313|EMBL:CBK41178.1}; Putative trypsin-like serine protease {ECO:0000313|EMBL:ACE75585.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_764_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12018..12644
DNA (627bp) protein (209aa)
Putative Outer membrane lipoprotein, Slp family Tax=Candidatus Nitrospira defluvii RepID=B3U4L9_9BACT
putative outer membrane lipoprotein Slp
Putative Outer membrane lipoprotein, Slp family {ECO:0000313|EMBL:CBK41179.1}; Putative outer membrane lipoprotein {ECO:0000313|EMBL:ACE75586.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_764_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12641..13501)
DNA (861bp) protein (287aa)
Putative uncharacterized protein ypfJ Tax=Candidatus Nitrospira defluvii RepID=B3U4M0_9BACT
ypfJ; hypothetical protein
Putative uncharacterized protein ypfJ {ECO:0000313|EMBL:ACE75587.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41180.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_764_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

13647..14285
DNA (639bp) protein (213aa)
Exported protein Tax=Candidatus Nitrospira defluvii RepID=B3U4M2_9BACT
hypothetical protein
Exported protein {ECO:0000313|EMBL:ACE75589.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41182.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_764_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14409..15035
DNA (627bp) protein (209aa)
rluE; 23S rRNA pseudouridylate synthase E (EC:4.2.1.70 5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Pseudouridine synthase Tax=Candidatus Nitrospira defluvii RepID=B3U4M3_9BACT
anamox4_curated_scaffold_764_13
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15032..15682
DNA (651bp) protein (217aa)
Guanine deaminase {ECO:0000313|EMBL:EGV18991.1}; EC=3.5.4.3 {ECO:0000313|EMBL:EGV18991.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
Guanine deaminase Tax=Thiocapsa marina 5811 RepID=F9UA43_9GAMM
hypothetical protein
anamox4_curated_scaffold_764_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15815..16345
DNA (531bp) protein (177aa)
Exported protein Tax=Candidatus Nitrospira defluvii RepID=B3U4M5_9BACT
hypothetical protein
Exported protein {ECO:0000313|EMBL:ACE75592.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41185.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_764_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(16356..17399)
DNA (1044bp) protein (348aa)
Conserved exported protein Tax=Candidatus Nitrospira defluvii RepID=B3U4N0_9BACT
putative oxidoreductase
Conserved exported protein {ECO:0000313|EMBL:ACE75597.1}; Putative Oxidoreductase, molybdopterin binding {ECO:0000313|EMBL:CBK41190.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox4_curated_scaffold_764_16S_1
unknown

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17706..19239
DNA (1534bp)
16S ribosomal RNA (16S rRNA)
anamox4_curated_scaffold_764_16
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18157..18384
DNA (228bp) protein (76aa)
Uncharacterized protein (Fragment) Tax=Clostridium sp. BL8 RepID=T0NDH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB88155.1}; Flags: Fragment;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
anamox4_curated_scaffold_764_trna_1
unknown

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19409..19482
DNA (74bp)
transferRNA Ile
anamox4_curated_scaffold_764_trna_2
unknown

Not on your lists

19548..19620
DNA (73bp)
transferRNA Ala
Displaying 19 items

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