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anamox2_curated_scaffold_1757

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1757_1
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
tRNA dimethylallyltransferase Tax=planctomycete KSU-1 RepID=I3INT7_9PLAN
tRNA delta(2)-isopentenylpyrophosphate transferase
anamox2_curated_scaffold_1757_2
unknown

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comp(382..987)
DNA (606bp) protein (202aa)

This feature has no annotations

anamox2_curated_scaffold_1757_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1101..1499)
DNA (399bp) protein (133aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
anamox2_curated_scaffold_1757_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(1501..2022)
DNA (522bp) protein (174aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Adenine phosphoribosyltransferase Tax=uncultured prokaryote RepID=H5S9J7_9ZZZZ
adenine phosphoribosyltransferase
anamox2_curated_scaffold_1757_5
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2046..2840)
DNA (795bp) protein (265aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
hypothetical protein Tax=Woodsholea maritima RepID=UPI0003679B46
shikimate dehydrogenase
anamox2_curated_scaffold_1757_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(3365..4114)
DNA (750bp) protein (250aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Methionine aminopeptidase Tax=Clostridium RepID=A7VR31_9CLOT
Methionine aminopeptidase
anamox2_curated_scaffold_1757_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(4117..4770)
DNA (654bp) protein (218aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
adenylate kinase Tax=Hippea alviniae RepID=UPI0003B78B8A
adenylate kinase
anamox2_curated_scaffold_1757_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(4854..6212)
DNA (1359bp) protein (453aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B5D8D1
preprotein translocase, SecY subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_9
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(6209..6655)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 Tax=Chthonomonas calidirosea T49 RepID=S0EZW5_9BACT
LSU ribosomal protein L15P
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
anamox2_curated_scaffold_1757_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(6655..6915)
DNA (261bp) protein (87aa)
50S ribosomal protein L30 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WSZ1_9BACI
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00082687}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(6902..7468)
DNA (567bp) protein (189aa)
30S ribosomal protein S5 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B2F23C
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(7470..7823)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 Tax=Megasphaera RepID=D3LU18_9FIRM
ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(7836..8399)
DNA (564bp) protein (188aa)
50S ribosomal protein L6 Tax=Clostridium sp. CAG:265 RepID=R6LKY1_9CLOT
LSU ribosomal protein L6p (L9e)
50S ribosomal protein L6 {ECO:0000256|RuleBase:RU003870}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(8399..8794)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000375F6EE
ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_15
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


comp(8814..8999)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U9H2_OCEP5
SSU ribosomal protein s14p
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_16
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(9110..9880)
DNA (771bp) protein (257aa)
Predicted membrane protein Tax=Chthonomonas calidirosea T49 RepID=S0ET85_9BACT
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CCW34609.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
anamox2_curated_scaffold_1757_17
unknown

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9960..10475
DNA (516bp) protein (172aa)

This feature has no annotations

anamox2_curated_scaffold_1757_18
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10472..11116
DNA (645bp) protein (215aa)
Conserved protein of DIM6/NTAB family Tax=Chamaesiphon minutus PCC 6605 RepID=K9UEF1_9CHRO
conserved protein of DIM6/NTAB family
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:AFY92776.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
anamox2_curated_scaffold_1757_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

11131..14613
DNA (3483bp) protein (1161aa)
Chromosome partition protein Smc Tax=Chthonomonas calidirosea T49 RepID=S0EXR6_9BACT
Chromosome partition protein smc
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_20
unknown

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comp(14615..15424)
DNA (810bp) protein (270aa)

This feature has no annotations

anamox2_curated_scaffold_1757_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15421..17262)
DNA (1842bp) protein (614aa)
Hydrolase, coce/nond family protein Tax=Pontibacter sp. BAB1700 RepID=J1FLN2_9BACT
Putative hydrolase, CocE/NonD family {ECO:0000313|EMBL:CDM65259.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
X-Pro dipeptidyl-peptidase
anamox2_curated_scaffold_1757_22
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

17299..18183
DNA (885bp) protein (295aa)
UspA domain-containing protein Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3C8_9EURY
putative universal stress protein
Putative universal stress protein {ECO:0000313|EMBL:AIE86590.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_23
Cyanobium sp. PCC 7001, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18192..18515
DNA (324bp) protein (108aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. PCC 7001.;"
FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Cyanobium sp. PCC 7001 RepID=B5IN06_9CHRO
anamox2_curated_scaffold_1757_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

18515..19684
DNA (1170bp) protein (390aa)
peptidase, M16 family
Peptidase, M16 family {ECO:0000313|EMBL:AIE87539.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_1757_25
unknown

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19681..20889
DNA (1209bp) protein (403aa)

This feature has no annotations

anamox2_curated_scaffold_1757_26
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20886..21893)
DNA (1008bp) protein (336aa)
protein kinase Tax=Serinicoccus profundi RepID=UPI000255F7DD
Uncharacterized protein {ECO:0000313|EMBL:ERG64773.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
anamox2_curated_scaffold_1757_27
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21912..22490)
DNA (579bp) protein (193aa)
Leucine-rich repeat domain protein Tax=Planctomyces maris DSM 8797 RepID=A6C938_9PLAN
Leucine-rich repeat domain protein {ECO:0000313|EMBL:EDL58708.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
serine/threonine protein kinase
anamox2_curated_scaffold_1757_28
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(22494..23015)
DNA (522bp) protein (174aa)
thioredoxin family protein
Thioredoxin family protein {ECO:0000313|EMBL:AIE83639.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Uncharacterized protein bin=GWF2_Ignavibacteria_33_9 species=Riemerella anatipestifer genus=Riemerella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
anamox2_curated_scaffold_1757_29
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(23061..23948)
DNA (888bp) protein (296aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Methylenetetrahydrofolate reductase Tax=uncultured bacterium RepID=Q93A68_9BACT
MetX
Displaying 29 items

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