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anamox2_curated_scaffold_4283

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_4283_1
unknown

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3..425
DNA (423bp) protein (141aa)

This feature has no annotations

anamox2_curated_scaffold_4283_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(422..1648)
DNA (1227bp) protein (409aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Ribonuclease Y Tax=Clostridium sp. CAG:448 RepID=R6SHL1_9CLOT
HDIG/KH domain-containing protein
anamox2_curated_scaffold_4283_3
unknown

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comp(1648..1968)
DNA (321bp) protein (107aa)

This feature has no annotations

anamox2_curated_scaffold_4283_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(2084..3151)
DNA (1068bp) protein (356aa)
Protein RecA Tax=Clostridium thermocellum RepID=A3DEA3_CLOTH
RecA protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4283_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(3202..4362)
DNA (1161bp) protein (387aa)
FOG: FHA domain Tax=Chthonomonas calidirosea T49 RepID=S0EV04_9BACT
Alkaline serine protease, subtilase family
Alkaline serine protease, subtilase family {ECO:0000313|EMBL:AIE84768.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4283_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(4344..5888)
DNA (1545bp) protein (515aa)
Predicted Carbohydrate kinase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4H8_PELTS
YjeF protein, function unknown
Uncharacterized protein {ECO:0000313|EMBL:AIE84769.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4283_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

5981..6394
DNA (414bp) protein (138aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DGJ1_9FIRM
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
anamox2_curated_scaffold_4283_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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6395..7183
DNA (789bp) protein (263aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosa mine O-acyltransferase Tax=Chthonomonas calidirosea T49 RepID=S0EW39_9BACT
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
anamox2_curated_scaffold_4283_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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7271..8434
DNA (1164bp) protein (388aa)
Saccharopine dehydrogenase Tax=uncultured Chloroflexi bacterium RepID=H5SM32_9CHLR
saccharopine dehydrogenase family protein
Saccharopine dehydrogenase family protein {ECO:0000313|EMBL:AIE84690.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4283_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(8422..9342)
DNA (921bp) protein (307aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
N-acetylglucosamine-6-phosphate deacetylase Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L414_9BACI
N-acetylglucosamine-6-phosphate deacetylase
anamox2_curated_scaffold_4283_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(9339..10259)
DNA (921bp) protein (307aa)
DNA protecting protein DprA Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3J4F5_RHOS4
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake {ECO:0000313|EMBL:AIE84392.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4283_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(10398..11954)
DNA (1557bp) protein (519aa)
PQQ repeat protein Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XST6_NATM8
transmembrane serine/threonine protein kinase D
Transmembrane serine/threonine protein kinase D {ECO:0000313|EMBL:AIE84393.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox2_curated_scaffold_4283_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(12263..13132)
DNA (870bp) protein (290aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
ATP phosphoribosyltransferase Tax=Chthonomonas calidirosea T49 RepID=S0EW55_9BACT
ATP phosphoribosyltransferase
anamox2_curated_scaffold_4283_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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13226..13606
DNA (381bp) protein (127aa)
DNA mismatch repair protein MutS Tax=Chthonomonas calidirosea T49 RepID=S0EVZ0_9BACT
DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Displaying 14 items

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