ggKbase home page

anamox2_curated_scaffold_2894

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_2894_1
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

1..891
DNA (891bp) protein (297aa)
Two-component hybrid sensor and regulator bin=GWE2_Bacteroidetes_42_24 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
PAS/PAC sensor hybrid histidine kinase
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox2_curated_scaffold_2894_2
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

987..1376
DNA (390bp) protein (130aa)
UPI000192654C related cluster bin=GWE2_Bacteroidetes_42_24 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
two-component sensor
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox2_curated_scaffold_2894_3
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

1389..1649
DNA (261bp) protein (87aa)
Uncharacterized protein bin=GWF2_Bacteroidetes_41_31 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox2_curated_scaffold_2894_4
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(1663..2286)
DNA (624bp) protein (208aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase bin=GWF2_Bacteroidetes_49_14 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
pyridoxine 5'-phosphate oxidase
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox2_curated_scaffold_2894_5
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

2349..3572
DNA (1224bp) protein (408aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_41_31 species=Gramella forsetii genus=Gramella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Protein of unknown function DUF1684
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox2_curated_scaffold_2894_6
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

3582..5807
DNA (2226bp) protein (742aa)
Sensory box sensor histidine kinase bin=GWF2_Bacteroidetes_41_31 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
multi-sensor signal transduction histidine kinase
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox2_curated_scaffold_2894_7
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

5811..6413
DNA (603bp) protein (201aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains bin=GWF2_Bacteroidetes_41_31 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox2_curated_scaffold_2894_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6223..6819)
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNP5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00971.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_2894_9
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6856..7257)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI00036A09AA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ63583.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
anamox2_curated_scaffold_2894_10
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7396..9396
DNA (2001bp) protein (667aa)
Strongly similar to transketolase 1 thiamin-binding isozyme {ECO:0000313|EMBL:CAJ73432.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CAJ73432.1};; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
Strongly similar to transketolase 1 thiamin-binding isozyme Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q778_9BACT
transketolase
anamox2_curated_scaffold_2894_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9418..9900
DNA (483bp) protein (161aa)
Probable universal stress protein bin=GWE2_Bacteroidetes_42_39 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
universal stress protein
Tax=GWE2_Bacteroidetes_42_39_curated
anamox2_curated_scaffold_2894_12
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10027..10368
DNA (342bp) protein (114aa)
Alkylhydroperoxidase AhpD family core domain protein Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRN8_AEQSU
alkylhydroperoxidase
Tax=GWB2_Bacteroidetes_41_8_curated
anamox2_curated_scaffold_2894_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10365..10787
DNA (423bp) protein (141aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003722D38
Uncharacterized protein {ECO:0000313|EMBL:KIC94357.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
CMP/dCMP deaminase zinc-binding protein
anamox2_curated_scaffold_2894_14
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10850..11515
DNA (666bp) protein (222aa)
glycosyl transferase family protein bin=BACIGN_2 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
glycosyl transferase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Displaying 14 items

View Taxonomy