ggKbase home page

anamox2_curated_scaffold_1276

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1276_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1006
DNA (1005bp) protein (335aa)
ATP-dependent Clp protease ATP-binding protein Tax=Acidovorax sp. MR-S7 RepID=UPI00036C9B7E
ATP-dependent clp protease, ATP-binding subunit clpa {ECO:0000313|EMBL:GAD24015.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ATP-dependent Clp protease, ATP-binding subunit clpA
anamox2_curated_scaffold_1276_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1197..2084)
DNA (888bp) protein (296aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
3-hydroxyisobutyrate dehydrogenase Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJC8_ACIET
anamox2_curated_scaffold_1276_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2192..2584)
DNA (393bp) protein (131aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI0003627E5D
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
anamox2_curated_scaffold_1276_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2597..3763)
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenase Tax=Acidovorax sp. CF316 RepID=J1EHC1_9BURK
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
anamox2_curated_scaffold_1276_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3876..5387)
DNA (1512bp) protein (504aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase Tax=Acidovorax delafieldii 2AN RepID=C5T9M3_ACIDE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
anamox2_curated_scaffold_1276_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5496..6410
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family Tax=Acidovorax delafieldii 2AN RepID=C5T9M4_ACIDE
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EER58827.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
LysR family transcriptional regulator
anamox2_curated_scaffold_1276_7
Marinobacter sp. EVN1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6958..7695
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Marinobacter sp. EVN1 RepID=U7NUM5_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ERS86164.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. EVN1.;"
hypothetical protein
anamox2_curated_scaffold_1276_8
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7893..8858)
DNA (966bp) protein (322aa)
permease Tax=Acidovorax radicis RepID=UPI0002377078
Multidrug DMT transporter permease {ECO:0000313|EMBL:KJA11393.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
permease
anamox2_curated_scaffold_1276_9
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8945..9850
DNA (906bp) protein (302aa)
Transcriptional regulator Tax=Acidovorax sp. CF316 RepID=J1EN97_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJE53736.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
transcriptional regulator
anamox2_curated_scaffold_1276_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9869..12178)
DNA (2310bp) protein (770aa)
Peptidase S45 penicillin amidase Tax=Acidovorax sp. KKS102 RepID=K0I177_9BURK
Peptidase S45 penicillin amidase {ECO:0000313|EMBL:AFU46000.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
peptidase S45 penicillin amidase
anamox2_curated_scaffold_1276_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12321..13355
DNA (1035bp) protein (345aa)
AraC family transcriptional regulator Tax=Acidovorax sp. KKS102 RepID=K0IA48_9BURK
araC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AFU46001.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
anamox2_curated_scaffold_1276_12
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13356..13850)
DNA (495bp) protein (165aa)
Flavodoxin/nitric oxide synthase Tax=Ralstonia pickettii RepID=B2UIB6_RALPJ
flavodoxin
Flavodoxin {ECO:0000313|EMBL:AJW47253.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
anamox2_curated_scaffold_1276_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13967..14725
DNA (759bp) protein (253aa)
Cobalamin B12-binding domain protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RJ8_RHOP5
cobalamin B12-binding domain-containing protein
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:ABJ05436.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
anamox2_curated_scaffold_1276_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14728..15699
DNA (972bp) protein (324aa)
Diguanylate cyclase (GGDEF domain) Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219A8_RHOPB
diguanylate cyclase
Diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:ABD87028.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
anamox2_curated_scaffold_1276_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15819..16325
DNA (507bp) protein (169aa)
hypothetical protein bin=BDI species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1276_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16339..17958
DNA (1620bp) protein (540aa)
glucose-methanol-choline oxidoreductase bin=BDI species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glucose-methanol-choline oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1276_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17976..19502)
DNA (1527bp) protein (509aa)
High-affinity choline transport protein bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
high-affinity choline transport protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1276_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19901..21271
DNA (1371bp) protein (457aa)
tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1] bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tryptophanase (EC:4.1.99.1)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1276_19
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21310..21717)
DNA (408bp) protein (136aa)
ABC transporter related protein Tax=Acidovorax RepID=A1W7A2_ACISJ
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACM33205.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Displaying 19 items

View Taxonomy