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anamox2_curated_scaffold_1588

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1588_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..674)
DNA (672bp) protein (224aa)
Catalase-peroxidase bin=GWF2_Nitrospirae_44_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
catalase/peroxidase HPI
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
anamox2_curated_scaffold_1588_2
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(667..1116)
DNA (450bp) protein (150aa)
Ferric uptake regulator, Fur family Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM11_ALKOO
ferric uptake regulator family protein
Tax=RBG_13_Chloroflexi_50_21_curated
anamox2_curated_scaffold_1588_3
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1194..2720)
DNA (1527bp) protein (509aa)
NB-ARC domain-containing protein Tax=Oscillochloris trichoides DG-6 RepID=E1IHJ9_9CHLR
NB-ARC domain-containing protein {ECO:0000313|EMBL:EFO79362.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
anamox2_curated_scaffold_1588_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2834..3310)
DNA (477bp) protein (159aa)
hypothetical protein bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1588_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3381..3800)
DNA (420bp) protein (140aa)
Ohr subfamily peroxiredoxin bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Ohr subfamily peroxiredoxin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1588_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3854..4318)
DNA (465bp) protein (155aa)
MarR family transcriptional regulator Tax=Curvibacter lanceolatus RepID=UPI00036BAE81
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABX33841.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
anamox2_curated_scaffold_1588_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4439..5266)
DNA (828bp) protein (276aa)
enoyl-CoA hydratase Tax=Acidovorax radicis RepID=UPI0002376D85
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AFU44290.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
anamox2_curated_scaffold_1588_8
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5309..6973)
DNA (1665bp) protein (555aa)
Dicarboxylate-CoA ligase PimA Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWZ6_9BRAD
AMP-dependent synthetase {ECO:0000313|EMBL:KIF80538.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
AMP-dependent synthetase and ligase
anamox2_curated_scaffold_1588_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6981..8216)
DNA (1236bp) protein (412aa)
ABC-type branched-chain amino acid transport system, periplasmic component Tax=Variovorax sp. CF313 RepID=J2KFU9_9BURK
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL72013.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
extracellular ligand-binding receptor
anamox2_curated_scaffold_1588_10

Not on your lists

comp(8542..9390)
DNA (849bp) protein (283aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
Uncharacterized protein {ECO:0000313|EMBL:EKD97028.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
anamox2_curated_scaffold_1588_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9785..10420
DNA (636bp) protein (212aa)
hypothetical protein bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1588_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10425..11783)
DNA (1359bp) protein (453aa)
Putative GAF sensor protein Tax=Acidovorax sp. KKS102 RepID=K0HZ88_9BURK
GAF sensor protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1588_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11780..12280)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Acidovorax sp. KKS102 RepID=K0HWQ3_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1588_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12286..13095)
DNA (810bp) protein (270aa)
ABC-2 type transporter, NodJ family Tax=Acidovorax sp. (strain JS42) RepID=A1WC48_ACISJ
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
anamox2_curated_scaffold_1588_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13120..14106)
DNA (987bp) protein (329aa)
Fe(3+)-transporting ATPase bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1588_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14242..15489
DNA (1248bp) protein (416aa)
Uncharacterized protein Tax=Acidovorax sp. (strain JS42) RepID=A1WC46_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43821.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
anamox2_curated_scaffold_1588_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15589..17070)
DNA (1482bp) protein (494aa)
AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase Tax=Acidovorax radicis RepID=UPI0002376D75
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1588_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17096..18514)
DNA (1419bp) protein (473aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying 18 items

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