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anamox2_curated_scaffold_1118

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1118_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..777)
DNA (777bp) protein (259aa)
histone deacetylase superfamily protein bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
histone deacetylase superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(778..1803)
DNA (1026bp) protein (342aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:5.1.99.4) bin=BDI species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
L-carnitine dehydratase/bile acid-inducible protein F (EC:5.1.99.4)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1809..2975)
DNA (1167bp) protein (389aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] bin=BDI species=Alcanivorax pacificus genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2968..5115)
DNA (2148bp) protein (716aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17); K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] bin=BDI species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5129..6334)
DNA (1206bp) protein (402aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] bin=BDI species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6378..7532)
DNA (1155bp) protein (385aa)
acyl-CoA dehydrogenase (EC:1.3.99.13); K00255 long-chain-acyl-CoA dehydrogenase [EC:1.3.99.13] bin=BDI species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7794..8429
DNA (636bp) protein (212aa)
TetR family transcriptional regulator bin=BDI species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_trna_2
unknown

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comp(8486..8557)
DNA (72bp)
transferRNA Val
anamox2_curated_scaffold_1118_trna_1
unknown

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comp(8601..8672)
DNA (72bp)
transferRNA Val
anamox2_curated_scaffold_1118_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8710..9423)
DNA (714bp) protein (238aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon Tax=Acidovorax sp. MR-S7 RepID=UPI00037F08BD
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases {ECO:0000313|EMBL:GAD23490.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
anamox2_curated_scaffold_1118_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9423..9761)
DNA (339bp) protein (113aa)
ferredoxin, 2fe-2S type, isc system; K04755 ferredoxin, 2Fe-2S bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ferredoxin, 2fe-2S type, isc system
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_10
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9788..11650)
DNA (1863bp) protein (621aa)
hscA; chaperone protein HscA bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hscA; chaperone protein HscA
anamox2_curated_scaffold_1118_11
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11724..12242)
DNA (519bp) protein (173aa)
Co-chaperone protein HscB homolog Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TPY3_ACIAC
co-chaperone Hsc20
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
anamox2_curated_scaffold_1118_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12398..12721)
DNA (324bp) protein (108aa)
iron-sulfur cluster assembly protein IscA bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
iron-sulfur cluster assembly protein IscA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12728..13126)
DNA (399bp) protein (133aa)
FeS cluster assembly scaffold IscU Tax=Acidovorax sp. KKS102 RepID=K0I126_9BURK
FeS cluster assembly scaffold IscU
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:AFU45965.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
anamox2_curated_scaffold_1118_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13147..14361)
DNA (1215bp) protein (405aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Cysteine desulfurase Tax=Acidovorax delafieldii 2AN RepID=C5T2B7_ACIDE
cysteine desulfurase IscS
anamox2_curated_scaffold_1118_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14484..15020)
DNA (537bp) protein (179aa)
DNA-binding protein Tax=Comamonas sp. B-9 RepID=UPI000395B411
BadM/Rrf2 family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15246..17345)
DNA (2100bp) protein (700aa)
excinuclease ABC subunit B bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
excinuclease ABC subunit B
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_17
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17459..18655
DNA (1197bp) protein (399aa)
aromatic amino acid aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:ABM42319.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABM42319.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Aminotransferase Tax=Acidovorax sp. (strain JS42) RepID=A1W7U4_ACISJ
anamox2_curated_scaffold_1118_18
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18744..19610)
DNA (867bp) protein (289aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIS6_ACIET
extradiol ring-cleavage dioxygenase class IIi protein subunit b
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:ACM33092.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
anamox2_curated_scaffold_1118_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19693..20583
DNA (891bp) protein (297aa)
L-carnitine dehydratase/bile acid-inducible protein F bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21167..21691)
DNA (525bp) protein (175aa)
hypothetical protein bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21733..22257
DNA (525bp) protein (175aa)
fkbp-type peptidyl-prolyl cis-trans isomerase bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
fkbp-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1118_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22274..22777)
DNA (504bp) protein (168aa)
17 kDa surface antigen Tax=Acidovorax sp. NO-1 RepID=H0C115_9BURK
17 kDa surface antigen {ECO:0000313|EMBL:EHL21670.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
17 kDa surface antigen
anamox2_curated_scaffold_1118_23
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22875..23324)
DNA (450bp) protein (150aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase Tax=Hydrogenophaga sp. PBC RepID=I4MQ08_9BURK
Tax=BJP_08E140C01_Burkholderiales_65_30
anamox2_curated_scaffold_1118_24
unknown

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comp(23321..23740)
DNA (420bp) protein (140aa)

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Displaying 26 items

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