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anamox2_curated_scaffold_1625

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1625_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..856)
DNA (855bp) protein (285aa)
Flagellar hook protein FlgE Tax=Acidovorax sp. NO-1 RepID=H0BWF6_9BURK
fagellar hook-basal body protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1625_2

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comp(887..1552)
DNA (666bp) protein (222aa)
Flagellar basal-body rod modification protein FlgD Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VUM6_9BACT
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:AGC70971.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar hook capping protein
anamox2_curated_scaffold_1625_3

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comp(1569..1973)
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgC Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VXU0_9BACT
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar basal body rod protein FlgC
anamox2_curated_scaffold_1625_4

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comp(1998..2426)
DNA (429bp) protein (143aa)
Flagellar basal body rod protein FlgB Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VU66_9BACT
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar basal-body rod protein FlgB
anamox2_curated_scaffold_1625_5

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2643..3374
DNA (732bp) protein (244aa)
Flagellar basal-body P-ring formation protein FlgA Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VVD3_9BACT
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagella basal body P-ring formation protein FlgA
anamox2_curated_scaffold_1625_6

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3467..3796
DNA (330bp) protein (110aa)
Anti-sigma-28 factor, FlgM Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VPZ9_9BACT
Anti-sigma-28 factor, FlgM {ECO:0000313|EMBL:AGC70967.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar biosynthesis anti-sigma factor protein FlgM
anamox2_curated_scaffold_1625_7

Not on your lists

3835..4191
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VUM2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC70966.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
hypothetical protein
anamox2_curated_scaffold_1625_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4198..4929)
DNA (732bp) protein (244aa)
RNA polymerase sigma-28 subunit FliA/WhiG bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
FliA/WhiG family RNA polymerase sigma factor
anamox2_curated_scaffold_1625_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4936..5739)
DNA (804bp) protein (268aa)
hypothetical protein bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1625_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5732..7237)
DNA (1506bp) protein (502aa)
GTP-binding signal recognition particle bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
GTP-binding signal recognition particle
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1625_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7240..9315)
DNA (2076bp) protein (692aa)
flagellar biosynthesis protein FlhA bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
flagellar biosynthesis protein FlhA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1625_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9312..10466)
DNA (1155bp) protein (385aa)
type III secretion exporter bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
type III secretion exporter
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1625_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10567..11205)
DNA (639bp) protein (213aa)
chemotaxis phosphatase, Chez bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
chemotaxis phosphatase, CheZ
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1625_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11211..11597)
DNA (387bp) protein (129aa)
response regulator receiver protein bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1625_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11664..12602)
DNA (939bp) protein (313aa)
ompA/MotB domain-containing protein bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
OmpA/MotB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_1625_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12627..13487)
DNA (861bp) protein (287aa)
MotA/TolQ/ExbB proton channel Tax=Alicycliphilus denitrificans RepID=E8TSX3_ALIDB
flagellar motor stator protein MotA
Flagellar motor stator protein MotA {ECO:0000313|EMBL:AEB86527.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
anamox2_curated_scaffold_1625_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13793..16687
DNA (2895bp) protein (965aa)
Tetratricopeptide TPR_2 repeat protein Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQ47_DELAS
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABX33262.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
anamox2_curated_scaffold_1625_18
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16684..17814
DNA (1131bp) protein (377aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein Tax=Burkholderia cenocepacia RepID=T0G450_9BURK
putative aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:ERI29314.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia BC7.;"
Displaying 18 items

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