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anamox2_curated_scaffold_521

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_521_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..282
DNA (282bp) protein (94aa)
Integrase catalytic region protein Tax=Alicycliphilus denitrificans RepID=E8TR51_ALIDB
integrase catalytic region protein
Integrase catalytic region protein {ECO:0000313|EMBL:GAO21139.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
anamox2_curated_scaffold_521_2
unknown

Not on your lists

1019..1252
DNA (234bp) protein (78aa)

This feature has no annotations

anamox2_curated_scaffold_521_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1931..2344)
DNA (414bp) protein (138aa)
glyoxalase/bleomycin resistance protein/dioxygenase bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2456..3589)
DNA (1134bp) protein (378aa)
diguanylate cyclase domain-containing protein bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
diguanylate cyclase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3722..4372)
DNA (651bp) protein (217aa)
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4486..5676
DNA (1191bp) protein (397aa)
GntR family transcriptional regulator bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
GntR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
anamox2_curated_scaffold_521_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5677..6927)
DNA (1251bp) protein (417aa)
PAS/PAC sensor-containing diguanylate cyclase bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PAS/PAC sensor-containing diguanylate cyclase
Tax=GWA2_Burkholderiales_64_37_curated
anamox2_curated_scaffold_521_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7063..7794)
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Acidovorax delafieldii 2AN RepID=C5T6F1_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59952.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hemerythrin hhe cation-binding domain-containing protein
anamox2_curated_scaffold_521_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7890..8375
DNA (486bp) protein (162aa)
BadM/Rrf2 family transcriptional regulator bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
BadM/Rrf2 family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8370..8906)
DNA (537bp) protein (179aa)
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8909..9625)
DNA (717bp) protein (239aa)
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
phosphoserine phosphatase SerB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9658..10314)
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRG8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99069.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
anamox2_curated_scaffold_521_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10319..13786)
DNA (3468bp) protein (1156aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Transcription-repair-coupling factor Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDB8_ALIDK
transcription-repair coupling factor
anamox2_curated_scaffold_521_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13974..14723
DNA (750bp) protein (250aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14720..15199
DNA (480bp) protein (160aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_16
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15297..17045)
DNA (1749bp) protein (583aa)
Histidine kinase Tax=Acidovorax delafieldii 2AN RepID=C5T9R9_ACIDE
Histidine kinase {ECO:0000313|EMBL:EER58777.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
two component transcriptional regulator, sensor histidine kinase
anamox2_curated_scaffold_521_17
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17035..17655)
DNA (621bp) protein (207aa)
Two component transcriptional regulator, LuxR family Tax=Acidovorax delafieldii 2AN RepID=C5T9S0_ACIDE
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EER58778.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
agmR; Glycerol metabolism activator
anamox2_curated_scaffold_521_18
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17875..19605
DNA (1731bp) protein (577aa)
Putative internalin A-like exported protein Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X1H7_BACMS
putative internalin A-like exported protein
Putative internalin A-like exported protein {ECO:0000313|EMBL:CBW26568.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
anamox2_curated_scaffold_521_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19750..21231)
DNA (1482bp) protein (494aa)
integral membrane sensor signal transduction histidine kinase bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21264..21998)
DNA (735bp) protein (245aa)
ompR; osmolarity response regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
winged helix family two component transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_21
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22136..22867)
DNA (732bp) protein (244aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase I, FolE {ECO:0000313|EMBL:CBL46009.1}; EC=3.5.4.16 {ECO:0000313|EMBL:CBL46009.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
GTP cyclohydrolase I, FolE Tax=gamma proteobacterium HdN1 RepID=E1VMG7_9GAMM
anamox2_curated_scaffold_521_22
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22958..23659)
DNA (702bp) protein (234aa)
Putative ECF-family RNA polymerase sigma factor Tax=Bordetella RepID=K4QEG6_BORBO
RNA polymerase sigma factor
Putative ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CCN22541.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
anamox2_curated_scaffold_521_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23665..24390)
DNA (726bp) protein (242aa)
Oxidoreductase FAD/NAD(P)-binding domain protein Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZJ4_ALIDB
oxidoreductase fad/nad(p)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ADU98541.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
anamox2_curated_scaffold_521_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24634..25245
DNA (612bp) protein (204aa)
hypothetical protein bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25300..26088)
DNA (789bp) protein (263aa)
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30) bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
3-hydroxybutyrate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26156..27103
DNA (948bp) protein (316aa)
Alpha/beta hydrolase fold protein Tax=Acidovorax sp. KKS102 RepID=K0I115_9BURK
alpha/beta fold family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27100..29331
DNA (2232bp) protein (744aa)
(p)ppGpp synthetase I SpoT/RelA bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
(p)ppGpp synthetase I SpoT/RelA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_521_trna_1
unknown

Not on your lists

29405..29478
DNA (74bp)
transferRNA Val
anamox2_curated_scaffold_521_28
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29703..29957
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCB9_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33824.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
anamox2_curated_scaffold_521_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29987..30247
DNA (261bp) protein (87aa)
UPI0003D3B89B related cluster Tax=unknown RepID=UPI0003D3B89B
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
infA; translation initiation factor if-1
Displaying items 1-30 of 38 in total

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