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anamox2_curated_scaffold_2454

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_2454_1
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3..2045
DNA (2043bp) protein (681aa)
ial:IALB_2907 Outer membrane receptor protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Outer membrane receptor protein
Outer membrane receptor protein {ECO:0000313|EMBL:AFH50610.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2069..4813
DNA (2745bp) protein (915aa)
ial:IALB_2906 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH50609.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_3
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4833..5828
DNA (996bp) protein (332aa)
ial:IALB_2905 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=GWB2_Ignavibacteria_35_6b_curated
anamox2_curated_scaffold_2454_4
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5830..7047
DNA (1218bp) protein (406aa)
ppn:Palpr_1612 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_2454_5
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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7054..9114
DNA (2061bp) protein (687aa)
Cyanophycinase-like protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANQ0_IGNAJ
cyanophycinase-like protein
Cyanophycinase-like protein {ECO:0000313|EMBL:AFH50607.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_6
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9111..10604
DNA (1494bp) protein (498aa)
ial:IALB_2902 Putative carboxypeptidase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
carboxypeptidase
Putative carboxypeptidase {ECO:0000313|EMBL:AFH50605.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_7
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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10819..11958
DNA (1140bp) protein (380aa)
cap:CLDAP_29660 putative L-lysine 6-dehydrogenase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
putative L-lysine 6-dehydrogenase
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_2454_8
Serratia sp. M24T3, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11964..12974
DNA (1011bp) protein (337aa)
1-aminocyclopropane-1-carboxylate deaminase Tax=Serratia sp. M24T3 RepID=I0QVG5_9ENTR
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:EIC85288.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. M24T3.;"
pyridoxal-5'-phosphate-dependent protein
anamox2_curated_scaffold_2454_9
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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13161..14669
DNA (1509bp) protein (503aa)
Beta-lactamase Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SGG4_PLABD
beta-lactamase
Tax=RBG_13_Planctomycetes_63_9_curated
anamox2_curated_scaffold_2454_10
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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14779..15888
DNA (1110bp) protein (370aa)
ial:IALB_2901 menC; O-succinylbenzoate synthase; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rule:MF_01933};; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase {ECO:0000256|HAMAP-Rule:MF_01933}; o-succinylbenzoic acid synthase {ECO:0000256|HAMAP-Rule:MF_01933}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
menC; O-succinylbenzoate synthase
anamox2_curated_scaffold_2454_11
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(15894..16028)
DNA (135bp) protein (45aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_2454_12
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(16225..16539)
DNA (315bp) protein (105aa)
DNA polymerase beta domain protein region bin=GWF2_Ignavibacteria_35_20 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
nucleotidyltransferase family protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_2454_13
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(16827..17306)
DNA (480bp) protein (160aa)
IscR family transcriptional regulator bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
IscR family transcriptional regulator
Tax=RBG_16_Ignavibacteria_35_7_curated
anamox2_curated_scaffold_2454_14
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17397..17930)
DNA (534bp) protein (178aa)
ial:IALB_2899 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH50602.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_15
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(17989..18312)
DNA (324bp) protein (108aa)
Putative metal-sulfur cluster biosynthetic enzyme bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
metal-sulfur cluster biosynthetic enzyme
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox2_curated_scaffold_2454_16
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(18404..18862)
DNA (459bp) protein (153aa)
NifU-like protein; K04488 nitrogen fixation protein NifU and related proteins bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
nifU-like protein
NifU-like protein {ECO:0000313|EMBL:AFH50600.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_17
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(18862..20121)
DNA (1260bp) protein (420aa)
ial:IALB_2896 sufS; Cysteine desulfurase SufS; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
sufS; cysteine desulfurase SufS
anamox2_curated_scaffold_2454_18
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(20132..21448)
DNA (1317bp) protein (439aa)
ial:IALB_2895 sufD; Fe-S cluster assembly protein SufD; K09015 Fe-S cluster assembly protein SufD bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
sufD; Fe-S cluster assembly protein SufD
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox2_curated_scaffold_2454_19
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21494..22261)
DNA (768bp) protein (256aa)
ial:IALB_2894 sufC; Fe-S cluster assembly ATP-binding protein SufC; K09013 Fe-S cluster assembly ATP-binding protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
sufC; Fe-S cluster assembly ATP-binding protein SufC
Fe-S cluster assembly ATP-binding protein SufC {ECO:0000313|EMBL:AFH50597.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_20
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22360..23808)
DNA (1449bp) protein (483aa)
ial:IALB_2893 sufB; Fe-S cluster assembly protein SufB; K09014 Fe-S cluster assembly protein SufB bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
sufB; Fe-S cluster assembly protein SufB
Fe-S cluster assembly protein SufB {ECO:0000313|EMBL:AFH50596.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_trna_1
unknown

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24119..24191
DNA (73bp)
transferRNA Arg
anamox2_curated_scaffold_2454_21
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(24153..24968)
DNA (816bp) protein (272aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
anamox2_curated_scaffold_2454_22
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(25014..25928)
DNA (915bp) protein (305aa)
ial:IALB_2709 rfbD; dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
rfbD; dTDP-4-dehydrorhamnose reductase
Tax=CG_Ignavi_02
anamox2_curated_scaffold_2454_23
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(25935..26786)
DNA (852bp) protein (284aa)
PfkB family carbohydrate kinase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
PfkB family carbohydrate kinase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
anamox2_curated_scaffold_2454_24
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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26911..28038
DNA (1128bp) protein (376aa)
ial:IALB_2711 Glycosyltransferase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
glycosyltransferase
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox2_curated_scaffold_2454_25
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

28040..28462
DNA (423bp) protein (141aa)
Nucleoside 2-deoxyribosyltransferase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN58_IGNAJ
Nucleoside 2-deoxyribosyltransferase
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox2_curated_scaffold_2454_26
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

28459..28887
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN59_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH50416.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_27
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

28887..30320
DNA (1434bp) protein (478aa)
ial:IALB_2714 rsmF; tRNA/rRNA cytosine-C5-methylase; K11392 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
rsmF; tRNA/rRNA cytosine-C5-methylase
tRNA/rRNA cytosine-C5-methylase {ECO:0000313|EMBL:AFH50417.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_2454_28
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(30322..31509)
DNA (1188bp) protein (396aa)
ial:IALB_0636 Bifunctional xylanase/esterase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Bifunctional xylanase/esterase
Bifunctional xylanase/esterase {ECO:0000313|EMBL:AFH48348.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Displaying 29 items

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