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anamox2_curated_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 352 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_2_1
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1028
DNA (1026bp) protein (342aa)
UPI0003CE8DD8 related cluster Tax=unknown RepID=UPI0003CE8DD8
Aminotransferase {ECO:0000313|EMBL:ESY83038.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
class III aminotransferase
anamox2_curated_scaffold_2_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1038..1967
DNA (930bp) protein (310aa)
3-keto-5-aminohexanoate cleavage protein Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FS14_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX11923.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
anamox2_curated_scaffold_2_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2092..2751)
DNA (660bp) protein (220aa)
Putative D-methionine transport system permease protein MetI Tax=Shinella zoogloeoides DD12 RepID=V5ENP2_9RHIZ
Putative D-methionine transport system permease protein MetI {ECO:0000313|EMBL:EYR79347.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative permease component of ABC transporter
anamox2_curated_scaffold_2_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2732..3844)
DNA (1113bp) protein (371aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
DL-methionine transporter subunit ATP-binding component of ABC superfamily Tax=Mesorhizobium sp. STM 4661 RepID=M5F1A2_9RHIZ
ABC transporter
anamox2_curated_scaffold_2_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3961..4806)
DNA (846bp) protein (282aa)
UPI0003CFF1EE related cluster Tax=unknown RepID=UPI0003CFF1EE
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
outer membrane lipoprotein
anamox2_curated_scaffold_2_6
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5010..5519)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Rhizobium/Agrobacterium group RepID=B9JAV8_AGRRK
hypothetical protein
GAF domain-containing protein {ECO:0000313|EMBL:EJK83513.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
anamox2_curated_scaffold_2_7
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5676..6755)
DNA (1080bp) protein (360aa)
UPI0003D04D57 related cluster Tax=unknown RepID=UPI0003D04D57
Amino acid ABC transporter permease {ECO:0000313|EMBL:ESZ08496.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
polar amino acid ABC transporter inner membrane subunit
anamox2_curated_scaffold_2_8
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6752..7882)
DNA (1131bp) protein (377aa)
UPI0003D05866 related cluster Tax=unknown RepID=UPI0003D05866
Amino acid ABC transporter permease {ECO:0000313|EMBL:ESZ08497.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ABC transporter inner membrane protein
anamox2_curated_scaffold_2_9
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7977..9011)
DNA (1035bp) protein (345aa)
UPI0003CFE0A5 related cluster Tax=unknown RepID=UPI0003CFE0A5
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ30280.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
aapJ-2; polar amino acid ABC transport substrate-binding protein AapJ-2
anamox2_curated_scaffold_2_10
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9351..9875
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Rhizobium sp. AP16 RepID=J2CN52_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK78354.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
membrane protein
anamox2_curated_scaffold_2_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9877..10683
DNA (807bp) protein (269aa)
short-chain dehydrogenase Tax=Kurthia sp. JC8E RepID=UPI0002898D69
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU61417.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox2_curated_scaffold_2_12
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10673..11005)
DNA (333bp) protein (111aa)
UPI0003D02A75 related cluster Tax=unknown RepID=UPI0003D02A75
Uncharacterized protein {ECO:0000313|EMBL:ESZ30573.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
anamox2_curated_scaffold_2_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11002..11784)
DNA (783bp) protein (261aa)
UPI0003CFCE97 related cluster Tax=unknown RepID=UPI0003CFCE97
ABC transporter {ECO:0000313|EMBL:ESZ30282.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
ABC transporter
anamox2_curated_scaffold_2_14
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11778..12770)
DNA (993bp) protein (331aa)
UPI0003D03E25 related cluster Tax=unknown RepID=UPI0003D03E25
ABC transporter permease {ECO:0000313|EMBL:ESZ30283.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
ABC transporter inner membrane protein
anamox2_curated_scaffold_2_15
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12784..13815)
DNA (1032bp) protein (344aa)
UPI0003CFBDCC related cluster Tax=unknown RepID=UPI0003CFBDCC
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ30284.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
anamox2_curated_scaffold_2_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13888..15213)
DNA (1326bp) protein (442aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:ESZ30285.1}; EC=2.5.1.49 {ECO:0000313|EMBL:ESZ30285.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
oahs; O-acetylhomoserine sulfhydrylase (EC:2.5.1.49)
PREDICTED: O-acetylhomoserine (thiol)-lyase-like Tax=Pantholops hodgsonii RepID=UPI0003C16DBB
anamox2_curated_scaffold_2_17
unknown

Not on your lists

comp(15229..15423)
DNA (195bp) protein (65aa)

This feature has no annotations

anamox2_curated_scaffold_2_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15744..16961
DNA (1218bp) protein (406aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
hypothetical protein Tax=Methyloferula stellata RepID=UPI00037DDD00
ackA; acetate kinase
anamox2_curated_scaffold_2_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16958..19357
DNA (2400bp) protein (800aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
phosphoketolase (EC:4.1.2.9)
phosphoketolase Tax=Methyloferula stellata RepID=UPI00037359EF
anamox2_curated_scaffold_2_20
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19367..20767)
DNA (1401bp) protein (467aa)
Glycolate oxidase subunit GlcD Tax=Shinella zoogloeoides DD12 RepID=V5CZY8_9RHIZ
FAD linked oxidase domain protein {ECO:0000313|EMBL:CDX27968.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
FAD linked oxidase
anamox2_curated_scaffold_2_21
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20795..21601)
DNA (807bp) protein (269aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U7I3_SINMW
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR59613.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
anamox2_curated_scaffold_2_22
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21603..22436)
DNA (834bp) protein (278aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U7I2_SINMW
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR59612.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
anamox2_curated_scaffold_2_23
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22446..23561)
DNA (1116bp) protein (372aa)
ABC transporter substrate-binding protein Tax=Sinorhizobium medicae RepID=UPI000374DE64
ABC transporter binding protein
ABC transporter, binding protein {ECO:0000313|EMBL:ABR59611.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
anamox2_curated_scaffold_2_24
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23645..24736)
DNA (1092bp) protein (364aa)
UPI0003CF46BB related cluster Tax=unknown RepID=UPI0003CF46BB
Spermidine/putrescine ABC transporter {ECO:0000313|EMBL:ESW84599.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ABC-type spermidine/putrescine transport system, ATPase component
anamox2_curated_scaffold_2_25
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24840..25748)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U7H9_SINMW
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABR59609.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
anamox2_curated_scaffold_2_26
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25908..27491
DNA (1584bp) protein (528aa)
metal-dependent amidase/aminoacylase/carboxypeptidase Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DBF048
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR59608.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
anamox2_curated_scaffold_2_27
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27523..29250
DNA (1728bp) protein (576aa)
amidohydrolase Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037D4A07
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ABR59607.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
anamox2_curated_scaffold_2_28
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29244..30215
DNA (972bp) protein (324aa)
hypothetical protein Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031D0ADB
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ABR59606.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
anamox2_curated_scaffold_2_29
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30212..31825
DNA (1614bp) protein (538aa)
hypothetical protein Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D5252D
thiamine pyrophosphate binding domain-containing protein
Thiamine pyrophosphate protein TPP binding domain protein {ECO:0000313|EMBL:ABR59605.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
anamox2_curated_scaffold_2_30

Not on your lists

comp(31835..32587)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Hyphomicrobium zavarzinii RepID=UPI0003650936
Uncharacterized protein {ECO:0000313|EMBL:KKN61744.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Crp/Fnr family transcription regulator
Displaying items 1-30 of 352 in total

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