ggKbase home page

anamox2_curated_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_219_1
unknown

Not on your lists

1..156
DNA (156bp) protein (52aa)

This feature has no annotations

anamox2_curated_scaffold_219_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

221..772
DNA (552bp) protein (184aa)
UPF0234 protein Niako_2171 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THT1_NIAKG
hypothetical protein
UPF0234 protein Niako_2171 {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_219_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


1180..1431
DNA (252bp) protein (84aa)
50S ribosomal protein L31 type B Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THT0_NIAKG
50S ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_219_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2039..3124
DNA (1086bp) protein (362aa)
Metallophosphoesterase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T717_NIAKG
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEV99038.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_219_5
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3131..3877)
DNA (747bp) protein (249aa)
Tax=GWF2_Bacteroidetes_35_48_curated
anamox2_curated_scaffold_219_6
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3970..5022
DNA (1053bp) protein (351aa)
id=3680757 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
anamox2_curated_scaffold_219_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5101..6342
DNA (1242bp) protein (414aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Imidazolonepropionase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THV6_NIAKG
imidazolonepropionase
anamox2_curated_scaffold_219_8
GWC1_OD1_42_11, Parcubacteria, Bacteria

Not on your lists

6366..7595
DNA (1230bp) protein (410aa)
hypothetical protein Tax=Hymenobacter aerophilus RepID=UPI000382E185
Sodium/proton antiporter, CPA1 family {ECO:0000313|EMBL:KKS27708.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_42_11.;"
hypothetical protein
anamox2_curated_scaffold_219_9
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(7607..8167)
DNA (561bp) protein (187aa)
Tax=RBG_16_Caldithrix_48_16_curated
anamox2_curated_scaffold_219_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8320..9558
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGU2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99544.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_219_11
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9624..10163
DNA (540bp) protein (180aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI000366E084
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI46907.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
anamox2_curated_scaffold_219_12
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10363..10644)
DNA (282bp) protein (94aa)
DNA methyltransferase Tax=Lewinella cohaerens RepID=UPI00036D65B5
hypothetical protein
Tax=RBG_13_Bacteroidetes_46_8_curated
anamox2_curated_scaffold_219_13
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

10826..12505
DNA (1680bp) protein (560aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase bin=GWF2_Bacteroidetes_33_16 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox2_curated_scaffold_219_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12502..14499)
DNA (1998bp) protein (666aa)
ABC transporter related protein Tax=Niabella soli DSM 19437 RepID=H1NLC2_9SPHI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC93741.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ABC transporter ATP-binding protein
anamox2_curated_scaffold_219_15
unknown

Not on your lists

14602..15339
DNA (738bp) protein (246aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00035F8CC5
anamox2_curated_scaffold_219_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15369..17741
DNA (2373bp) protein (791aa)
TonB-dependent receptor plug Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU8_NIAKG
TonB-dependent receptor {ECO:0000313|EMBL:KIC91910.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor plug
anamox2_curated_scaffold_219_17
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17884..18627
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NR57_9SPHI
Strain DSM 12611 Contig19, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51079.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
anamox2_curated_scaffold_219_18
R_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

18760..19005
DNA (246bp) protein (82aa)
Putative uncharacterized protein bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_36_11_curated
anamox2_curated_scaffold_219_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19008..19622)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBT8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98220.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_219_20
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19768..21033
DNA (1266bp) protein (422aa)
phosphodiesterase Tax=Pontibacter roseus RepID=UPI000365BF84
phosphodiesterase
Phosphodiesterase {ECO:0000313|EMBL:AKD04657.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
anamox2_curated_scaffold_219_21
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21106..22776
DNA (1671bp) protein (557aa)
Peptidase M28 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQU4_EMTOG
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AFK02047.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
anamox2_curated_scaffold_219_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22818..23663)
DNA (846bp) protein (282aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000378DFBF
Uncharacterized protein {ECO:0000313|EMBL:KIC93742.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox2_curated_scaffold_219_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23779..24981)
DNA (1203bp) protein (401aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000367065B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98540.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_219_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25085..27022
DNA (1938bp) protein (646aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Threonine--tRNA ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU4_NIAKG
threonyl-tRNA synthetase
anamox2_curated_scaffold_219_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27200..27802
DNA (603bp) protein (201aa)
translation initiation factor IF-3 Tax=Niabella aurantiaca RepID=UPI00036942FC
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_219_26
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27974..30520
DNA (2547bp) protein (849aa)
Putative uncharacterized protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5D5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28946.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
anamox2_curated_scaffold_219_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


30725..30922
DNA (198bp) protein (66aa)
50S ribosomal protein L35 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU2_NIAKG
50S ribosomal protein L35P
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_219_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


30970..31314
DNA (345bp) protein (115aa)
50S ribosomal protein L20 Tax=Niabella soli DSM 19437 RepID=H1NJL4_9SPHI
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_219_29
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31384..31947)
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S515_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY50932.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
anamox2_curated_scaffold_219_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32182..33597
DNA (1416bp) protein (472aa)
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Orn/DAP/Arg decarboxylase 2 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU0_NIAKG
Orn/DAP/Arg decarboxylase 2
Displaying items 1-30 of 63 in total

View Taxonomy