ggKbase home page

anamox2_curated_scaffold_1102

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1102_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1203)
DNA (1203bp) protein (401aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02903.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1102_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1287..4706
DNA (3420bp) protein (1140aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003719872
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KIC94705.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
methylmalonyl-CoA mutase
anamox2_curated_scaffold_1102_3
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4915..6216
DNA (1302bp) protein (434aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003802816
membrane-bound serine protease
Membrane-bound serine protease (ClpP class) {ECO:0000313|EMBL:AFD05894.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
anamox2_curated_scaffold_1102_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6228..7016
DNA (789bp) protein (263aa)
membrane protein Tax=Segetibacter koreensis RepID=UPI00037BB1FA
hypothetical protein
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:AEW02553.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1102_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7158..9521
DNA (2364bp) protein (788aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NJL6_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17077.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_1102_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9649..10461
DNA (813bp) protein (271aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK05_NIAKG
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:AEW02943.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1102_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10455..11651)
DNA (1197bp) protein (399aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI000362B851
Uncharacterized protein {ECO:0000313|EMBL:GAO43987.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
anamox2_curated_scaffold_1102_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11621..12382)
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG36_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01639.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1102_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12382..12882)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG35_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01638.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1102_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12884..14164)
DNA (1281bp) protein (427aa)
DNA-directed DNA polymerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK10_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92239.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA-directed DNA polymerase
anamox2_curated_scaffold_1102_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14207..14638)
DNA (432bp) protein (144aa)
SOS response UmuD protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK11_NIAKG
SOS response UmuD protein
SOS response UmuD protein {ECO:0000313|EMBL:AEW02949.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1102_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14712..15341
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK13_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02951.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1102_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15439..16584
DNA (1146bp) protein (382aa)
radical SAM protein Tax=Niabella aurantiaca RepID=UPI0003769235
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:AHF15019.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_1102_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16576..17031)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8N0_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKB12840.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
anamox2_curated_scaffold_1102_15
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17377..18549)
DNA (1173bp) protein (391aa)
membrane protein Tax=Niabella aurantiaca RepID=UPI00037AF298
Uncharacterized protein {ECO:0000313|EMBL:CDT10258.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
membrane protein
anamox2_curated_scaffold_1102_16
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18618..19199
DNA (582bp) protein (194aa)
Transferase hexapeptide repeat containing protein bin=GWA2_Bacteroidetes_42_15 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
transferase
Tax=GWE2_Bacteroidetes_42_39_curated
anamox2_curated_scaffold_1102_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19366..19896
DNA (531bp) protein (177aa)
NusG antitermination factor Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK30_NIAKG
NusG antitermination factor
NusG antitermination factor {ECO:0000313|EMBL:AEW02968.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1102_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19950..20765
DNA (816bp) protein (272aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003720EA4
Soluble ligand binding domain-containing protein
Soluble ligand binding domain protein {ECO:0000313|EMBL:AEW02969.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_1102_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20917..23241
DNA (2325bp) protein (775aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEW02970.1}; EC=2.7.10.2 {ECO:0000313|EMBL:AEW02970.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037E18EC
capsular exopolysaccharide family protein
anamox2_curated_scaffold_1102_20
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23253..24215
DNA (963bp) protein (321aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003804A01
Vi polysaccharide biosynthesis protein VipB/TviC
Vi polysaccharide biosynthesis protein VipB/TviC {ECO:0000313|EMBL:AKD02914.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
anamox2_curated_scaffold_1102_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24238..24342
DNA (105bp) protein (35aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein, partial Tax=Alistipes sp. AP11 RepID=UPI0003681A0B
hypothetical protein
Displaying 21 items

View Taxonomy