ggKbase home page

anamox2_curated_scaffold_2622

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_2622_1
RIFOXYB2_FULL_Sulfurimonas_37_5_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..665
DNA (663bp) protein (221aa)
Peptidase M16 domain protein bin=GWC2_Ignavibacteria_56_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
peptidase, M16 family protein
Tax=RIFOXYB2_FULL_Sulfurimonas_37_5_curated
anamox2_curated_scaffold_2622_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

860..1255
DNA (396bp) protein (132aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003698140
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17688.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_2622_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1378..1596
DNA (219bp) protein (73aa)
translation initiation factor IF-1 Tax=Segetibacter koreensis RepID=UPI0003660907
translation initiation factor 1 (bIF-1)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox2_curated_scaffold_2622_4
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1656..1772
DNA (117bp) protein (39aa)
50S ribosomal protein L36 Tax=Flavobacteriaceae RepID=A3U7N8_CROAH
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
anamox2_curated_scaffold_2622_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


1847..2227
DNA (381bp) protein (127aa)
30S ribosomal protein S13 Tax=Niabella aurantiaca RepID=UPI00035F8657
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_2622_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


2292..2705
DNA (414bp) protein (138aa)
30S ribosomal protein S11 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIA0_NIAKG
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_2622_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


2880..3485
DNA (606bp) protein (202aa)
30S ribosomal protein S4 Tax=Niabella soli DSM 19437 RepID=H1NUG5_9SPHI
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
anamox2_curated_scaffold_2622_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3604..4605
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA-directed RNA polymerase subunit alpha Tax=Niabella soli DSM 19437 RepID=H1NUG4_9SPHI
DNA-directed RNA polymerase subunit alpha
anamox2_curated_scaffold_2622_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


4714..5217
DNA (504bp) protein (168aa)
50S ribosomal protein L17 Tax=Niabella aurantiaca RepID=UPI0003620FBB
50S ribosomal protein L17P
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_2622_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5355..7934
DNA (2580bp) protein (860aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphoenolpyruvate carboxylase, type 1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK80_NIAKG
Phosphoenolpyruvate carboxylase, type 1
anamox2_curated_scaffold_2622_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8031..9440)
DNA (1410bp) protein (470aa)
Uncharacterized protein Tax=Sphingobacterium sp. (strain 21) RepID=F4C697_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD54361.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
anamox2_curated_scaffold_2622_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9451..12570)
DNA (3120bp) protein (1040aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI0003781498
TonB-dependent receptor {ECO:0000313|EMBL:KIC92147.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor
anamox2_curated_scaffold_2622_13
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12941..13072
DNA (132bp) protein (44aa)
Transposase IS4 family protein Tax=Galbibacter marinus RepID=K2PUY8_9FLAO
Transposase IS4 family protein {ECO:0000313|EMBL:EKF55289.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
Displaying 13 items

View Taxonomy