ggKbase home page

anamox2_curated_scaffold_4217

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_4217_1
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..239
DNA (237bp) protein (79aa)
5-methyltetrahydrofolate--homocysteine methyltransferase Tax=Reinekea blandensis MED297 RepID=A4BC32_9GAMM
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EAR10517.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
metH; B12-dependent methionine synthase
anamox2_curated_scaffold_4217_2
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(374..1003)
DNA (630bp) protein (210aa)
HAD family hydrolase Tax=Cytophagales str. B6 RepID=UPI0003B43832
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AKD02823.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
anamox2_curated_scaffold_4217_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1045..1776)
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02247.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_4217_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1895..2662
DNA (768bp) protein (256aa)
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:AEW02248.1}; EC=3.1.11.2 {ECO:0000313|EMBL:AEW02248.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Exodeoxyribonuclease III Xth Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J3_NIAKG
exodeoxyribonuclease III Xth
anamox2_curated_scaffold_4217_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2668..2973
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02249.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_4217_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3257..3526
DNA (270bp) protein (90aa)
Histone family protein DNA-binding protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J5_NIAKG
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:AEW02250.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_4217_7
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3620..3712
DNA (93bp) protein (31aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI000371F97F
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
anamox2_curated_scaffold_4217_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3773..4417)
DNA (645bp) protein (215aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J7_NIAKG
Pyridoxamine 5'-phosphate oxidase
anamox2_curated_scaffold_4217_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4661..5698)
DNA (1038bp) protein (346aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC95227.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox2_curated_scaffold_4217_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5789..6502)
DNA (714bp) protein (238aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Uridylate kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7K0_NIAKG
uridylate kinase
anamox2_curated_scaffold_4217_11
unknown

Not on your lists

6625..6741
DNA (117bp) protein (39aa)

This feature has no annotations

anamox2_curated_scaffold_4217_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6927..7766)
DNA (840bp) protein (280aa)
elongation factor Ts Tax=Niabella aurantiaca RepID=UPI000372ADFE
elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox2_curated_scaffold_4217_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(7890..8768)
DNA (879bp) protein (293aa)
30S ribosomal protein S2 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7K2_NIAKG
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_4217_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(8885..9271)
DNA (387bp) protein (129aa)
30S ribosomal protein S9 Tax=Niabella aurantiaca RepID=UPI00036B3623
30S ribosomal protein S9
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 14 items

View Taxonomy