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anamox2_curated_scaffold_337_6

Organism: anamox2_Sphingobacteriales_41_11_curated

partial RP 39 / 55 MC: 1 BSCG 37 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(10190..13591)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 1146.0
  • Bit_score: 1736
  • Evalue 0.0
transcription-repair coupling factor Tax=Segetibacter koreensis RepID=UPI00037008A6 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 1134.0
  • Bit_score: 1745
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 1146.0
  • Bit_score: 1736
  • Evalue 0.0

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3402
ATGATGAACAATGAGTTGTTGAAAATTTATCAGGATACCCCCCGCCTTTTTCAACTGGCGGACAGGCTTTCTTTTTCCCAACCACAAAAAGTTTTTCTTAAAAACCTTCATGGCAGCGCTTCGCAGTTTGTTTTTGCAGCGGCATTCTTGCACCCGGCGTGCAGCCAGCTGAACCACCTGATTATATTGAATGATGCGGAAGAAGCTGCTTATTTTCATAATACAATCGAAAACCTGACCGGGGCGCTGGATCTGTTTTATTTTCCTTCTTCTTTCCGTACCAGAAAGAATTTTAAACTGCTGAATTCCTCACATGTCATGCTGCGTACCGAAGCGCTGGCAAAATTTGCGGCAGGCGGTAATAAAAAAATCCTGGTTACTTACCCGGAGGCTCTCCAGGAAAAAGTAACAGTGCCTGACGCCCTTTCATTGAGCATCATTTCTATCAAAACAGCAGATCACCTTGATGTAGGCAGGCTGTTGCTGCAATTATCAGATTATGGCTTCGAGCGGACCGACTTTGTATATGAGCCGGGACAGTTTGCAATACGCGGCGGTATCCTTGATATTTATTCTTTCGGCAATGACAAACCATATCGTATCGAGTTGTTCGGTAATGAAGTGGATTCAATACGTATCATTGACCCCGAAACGCAACTGAGTGAGCGGAAACTATTACAGGTAAATATCATTCCCAATGTAGATACGCAATTTGAAAATGATGCAAAGGTCTCTCTGCCTGATTTTTTACCTGGGAACACTGTTTTATGGATACAGGACATGGATTGCTGTCTTGAAAAGATCAGGGAAACATCTTTGGAACTTAAGAATTTTTTGCTTGATGAAAATAAAATGGCAAAAACTCAGGCCAGCGGTGACCCGATGGAAAGAAAGGATATCAGTGCGGAAGATTTTATAACTGCGGATGAGTTAAATCAAAAAATCAGTAACAGGCATGTCGTGGAATTTGGGTACCGCTCTTCTCACAGTACATTCGAAATTGAATATAACACCAGGGAACAGCCTGCATTCAACCGGAGGTTTGACCTGCTGATGCAGGATCTGAAAGAATGGAAGAAAAAGAATTTCCGGATCTATTTGTTTGCAGGCAATTCGAAGCAGCTGGAGCGGCTTTACAGTATTTTCAGCGATCTGAAAGAAGAGATTCAATTCACCCCCATAGCTACTTCCATTCACGAAGGATTTATTGATGAGGACCTGAAAATCGTTTGCTACACCGACCACCAGATCTTTCAGCGTTATCATAAATACAACGTAAAACAGGCCTATAATAAAAACAAAGCGCTGACATTAAAAACTCTCCGTGAATTGCAGCCGGGGGATTATGTGACGCATATTGATCACGGCGTTGGTATTTTCAGCGGCCTTCAGAAACTGGAAGTGAACGGAAAGCTACAGGAAGTGGTACGCATCATTTATAAAGACAGTGATATTCTTTATGTCAATATCAACTCACTGCATAAAATTGCAAAGTACACCGGTAAAGAAGGAACGATACCCAGGATAAGCAAATTAGGCAGCGACACCTGGAATAAACTGAAGGAAAAGACAAAAACCAAAGTAAAAGAGATTGCGTTTGACCTGATCAAATTATACGCAAAGAGAAAAGCTCAGATGGGTTTTGCTCATTCGCCGGACAATTATATGCAGACAGAGCTGGAGGCTTCTTTTATTTATGAAGATACCCCTGATCAGAGTAAAGCGGCAGCAGATGTAAAAAAAGATATGGAATCACCATCACCCATGGACCGGTTGGTTTGCGGTGATGTAGGTTTTGGAAAAACCGAAGTTGCGATCAGGGCTGCTTTTAAGTCCTGTATTGATGGTAAGCAGGCTGCTGTTCTTGTTCCCACTACCATTCTTGCATTTCAGCATTACAAAACGTTCAGTGAACGGCTGAAAGATTTCCCGGTGACGGTGGATTATATCAACCGGTTTAAATCAACAAAGGAAAAGAAGGAAACACTGAAAAAACTCAGTGAAGGAAAAACAGAAATCATCATAGGCACACATGCGCTGCTGGGAAAAGATGTGAAGTTTAAAGATCTTGGTTTGCTGATCATTGATGAGGAACAAAAATTCGGTGTTGGGCATAAAGAAAAAATCAAAACGCTGAAGACAACCGTAGATTGCCTGACGCTCACCGCGACTCCCATACCACGTACTTTACAGTTTTCGCTGATGGGAGCGAGGGACCTGAGTATTATCAATACCCCGCCGCCCAACCGGCAGCCGATACAAACCGAAGTGATGGTGTATAACGAAGATGTGATCCGGGATGCAATTTATTTTGAAACAGAGAGGGGAGGCCAGGTGTTTTTTATTTTCAACCGTGTCAGCGGGCTGGCAGAAATGGCATCTATCATCCAGGGTTTGTGCCCTGACCTGAGTATCGGGTATGCACACGGCCAGATGGAAGGAAATGATCTTGAAAAAAGAGTTCTTGATTTCATTGATAAAAAATATGACGTTCTTGTTTGTACGAATATTGTAGAAAGCGGTGTGGATATTCCCAATGTAAACACGATCATCGTAAATAATGCTCACCAGTTCGGTTTGAGTGACCTTCACCAGCTGAGGGGGAGGGTCGGCCGCAGCAATAAAAAAGCGTTTTGCTATTTGCTGGCTCCGCCGGTAAGTACGTTGCCGGCTGATTCAAGAAAGCGTTTGCAGACATTGGAACAGCATAGCGACCTGGGCAGCGGTTTCCAGATCGCCATGAGAGACCTGGATATCCGGGGAGCAGGTAATTTATTGGGAGGCGAGCAAAGTGGTTTTATGGCAGAGATCGGTTTTGAAATGTATCAGAAGATACTGGATGAAGCAATCAGAGAATTAAAACGGACAGACTTCAAAGAATTGTTTAAAGAAGAAATTGCTAAGCAGGATGACTATGTGCAGGACTGCACCATTGATACAGACCTGGAGATACTGATCCCTGATGAATATGTGGAAAGCATTACAGAACGGTTATCACTTTATACCCGCATGGATAACTGTGAGACCAACGAAGAATTGGATCAGTTGAAACTTGAGCTGAAAGATCGTTTTGGCCCCATACCGCAGCAGGTGGAAGATCTCTTCATCACGGTTCGATGCAGGAAACTGGCGGTAGATCTCGGTTTTGAAAAAATGTCACTGAAAAGTGATACGTTGCGGTGCTATTTTATCAATAAAAATGACTCTCCTTATTTTGAATCTGAAACATTTAAAAAAATTCTTGCTTACATTCAGACCGGAACGAACAAAGCAAGGCTGAAGCAAGTTGGAAAAATGTTTTTATTGACAATCGGACCGATGGAAAATATGGAAGAGGTGATTCGTTTTCTTACCCAGTTGCATCAGTATTGTTTCAGGGAAAACAACGTGCCGGCAGTTTGA
PROTEIN sequence
Length: 1134
MMNNELLKIYQDTPRLFQLADRLSFSQPQKVFLKNLHGSASQFVFAAAFLHPACSQLNHLIILNDAEEAAYFHNTIENLTGALDLFYFPSSFRTRKNFKLLNSSHVMLRTEALAKFAAGGNKKILVTYPEALQEKVTVPDALSLSIISIKTADHLDVGRLLLQLSDYGFERTDFVYEPGQFAIRGGILDIYSFGNDKPYRIELFGNEVDSIRIIDPETQLSERKLLQVNIIPNVDTQFENDAKVSLPDFLPGNTVLWIQDMDCCLEKIRETSLELKNFLLDENKMAKTQASGDPMERKDISAEDFITADELNQKISNRHVVEFGYRSSHSTFEIEYNTREQPAFNRRFDLLMQDLKEWKKKNFRIYLFAGNSKQLERLYSIFSDLKEEIQFTPIATSIHEGFIDEDLKIVCYTDHQIFQRYHKYNVKQAYNKNKALTLKTLRELQPGDYVTHIDHGVGIFSGLQKLEVNGKLQEVVRIIYKDSDILYVNINSLHKIAKYTGKEGTIPRISKLGSDTWNKLKEKTKTKVKEIAFDLIKLYAKRKAQMGFAHSPDNYMQTELEASFIYEDTPDQSKAAADVKKDMESPSPMDRLVCGDVGFGKTEVAIRAAFKSCIDGKQAAVLVPTTILAFQHYKTFSERLKDFPVTVDYINRFKSTKEKKETLKKLSEGKTEIIIGTHALLGKDVKFKDLGLLIIDEEQKFGVGHKEKIKTLKTTVDCLTLTATPIPRTLQFSLMGARDLSIINTPPPNRQPIQTEVMVYNEDVIRDAIYFETERGGQVFFIFNRVSGLAEMASIIQGLCPDLSIGYAHGQMEGNDLEKRVLDFIDKKYDVLVCTNIVESGVDIPNVNTIIVNNAHQFGLSDLHQLRGRVGRSNKKAFCYLLAPPVSTLPADSRKRLQTLEQHSDLGSGFQIAMRDLDIRGAGNLLGGEQSGFMAEIGFEMYQKILDEAIRELKRTDFKELFKEEIAKQDDYVQDCTIDTDLEILIPDEYVESITERLSLYTRMDNCETNEELDQLKLELKDRFGPIPQQVEDLFITVRCRKLAVDLGFEKMSLKSDTLRCYFINKNDSPYFESETFKKILAYIQTGTNKARLKQVGKMFLLTIGPMENMEEVIRFLTQLHQYCFRENNVPAV*