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anamox2_curated_scaffold_337

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_337_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1..687
DNA (687bp) protein (229aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D73FB
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox2_curated_scaffold_337_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

735..2141
DNA (1407bp) protein (469aa)
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(Acyl-carrier-protein) dehydratase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP63_NIAKG
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(acyl-carrier-protein) dehydratase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox2_curated_scaffold_337_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2352..4331
DNA (1980bp) protein (660aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA gyrase subunit B Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK0_NIAKG
DNA gyrase subunit B
anamox2_curated_scaffold_337_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4462..4665
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMJ9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01987.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_337_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4737..10112)
DNA (5376bp) protein (1792aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI00036B1B46
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACT95524.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox2_curated_scaffold_337_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10190..13591)
DNA (3402bp) protein (1134aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
transcription-repair coupling factor Tax=Segetibacter koreensis RepID=UPI00037008A6
transcription-repair coupling factor
anamox2_curated_scaffold_337_7
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13660..14118)
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JJF7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD02652.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
anamox2_curated_scaffold_337_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14194..17982
DNA (3789bp) protein (1263aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0A6_9SPHI
subtilisin-like serine protease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox2_curated_scaffold_337_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18213..18932
DNA (720bp) protein (240aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000370C800
Oxidoreductase {ECO:0000313|EMBL:KIC96151.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ferredoxin--NAD(+) reductase
anamox2_curated_scaffold_337_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19043..19393
DNA (351bp) protein (117aa)
NADH-quinone oxidoreductase subunit {ECO:0000256|RuleBase:RU003639}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003639};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NADH-quinone oxidoreductase subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBC7_NIAKG
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
anamox2_curated_scaffold_337_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19384..19956
DNA (573bp) protein (191aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase subunit B Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBC8_NIAKG
NADH dehydrogenase subunit B
anamox2_curated_scaffold_337_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19966..20424
DNA (459bp) protein (153aa)
NADH-quinone oxidoreductase {ECO:0000256|RuleBase:RU003582}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003582};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBC9_NIAKG
NADH dehydrogenase (ubiquinone) 30 kDa subunit
anamox2_curated_scaffold_337_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20502..21650
DNA (1149bp) protein (383aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase subunit D Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD0_NIAKG
NAD(P)H-quinone oxidoreductase subunit H
anamox2_curated_scaffold_337_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21706..22773
DNA (1068bp) protein (356aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase subunit H Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD1_NIAKG
NADH dehydrogenase subunit H
anamox2_curated_scaffold_337_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22784..23266
DNA (483bp) protein (161aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD2_NIAKG
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:AEW03432.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_337_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23352..23924
DNA (573bp) protein (191aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD3_NIAKG
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:AEW03433.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_337_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23921..24235
DNA (315bp) protein (105aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NADH-quinone oxidoreductase subunit K Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD4_NIAKG
NAD(P)H-quinone oxidoreductase subunit 4L
anamox2_curated_scaffold_337_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24318..26246
DNA (1929bp) protein (643aa)
NADH dehydrogenase subunit L Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD5_NIAKG
NADH dehydrogenase {ECO:0000313|EMBL:KIC90067.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NADH dehydrogenase subunit L
anamox2_curated_scaffold_337_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26268..27794
DNA (1527bp) protein (509aa)
NADH dehydrogenase subunit M {ECO:0000313|EMBL:AEW03436.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEW03436.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH dehydrogenase subunit M Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD6_NIAKG
NADH dehydrogenase subunit M
anamox2_curated_scaffold_337_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27805..29232
DNA (1428bp) protein (476aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NADH-quinone oxidoreductase subunit N Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD7_NIAKG
NADH dehydrogenase subunit N
anamox2_curated_scaffold_337_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29289..29666
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03438.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox2_curated_scaffold_337_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29962..31347
DNA (1386bp) protein (462aa)
Tryptophanase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AMW4_IGNAJ
Tryptophanase {ECO:0000313|EMBL:KIC94251.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
tnaA; tryptophanase
anamox2_curated_scaffold_337_23
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31395..32780
DNA (1386bp) protein (462aa)
tyrosine phenol-lyase (EC:4.1.99.2)
Tyrosine phenol-lyase bin=GWF2_Ignavibacteria_35_20 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=BJP_IG2102_Flavobacteriales_34_12
anamox2_curated_scaffold_337_24
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32784..33395)
DNA (612bp) protein (204aa)
Lipid-binding START domain protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAB7_CHIPD
Lipid-binding START domain-containing protein {ECO:0000313|EMBL:AHM59461.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
lipid-binding START domain-containing protein
anamox2_curated_scaffold_337_25
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

33587..34204
DNA (618bp) protein (206aa)
HAD superfamily hydrolase Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DUP2_METI4
Hydrolase {ECO:0000313|EMBL:KIE58352.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
HAD superfamily hydrolase
anamox2_curated_scaffold_337_26
unknown

Not on your lists

comp(34360..34614)
DNA (255bp) protein (85aa)

This feature has no annotations

anamox2_curated_scaffold_337_27
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34849..38451)
DNA (3603bp) protein (1201aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Pyruvate-flavodoxin oxidoreductase Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GRV4_9SPHI
pyruvate:ferredoxin oxidoreductase subunit alpha
anamox2_curated_scaffold_337_28
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(38562..39845)
DNA (1284bp) protein (428aa)
Cystathionine beta-lyase/cystathionine gamma-synthase bin=GWF2_Ignavibacteria_35_20 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
cystathionine beta-lyase/cystathionine gamma-synthase
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_337_29
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39999..40499
DNA (501bp) protein (167aa)
Transcriptional regulator, AsnC family Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SC33_PEDSD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADY50618.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
anamox2_curated_scaffold_337_30
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

40615..41775
DNA (1161bp) protein (387aa)
Uroporphyrinogen decarboxylase (URO-D) bin=GWF2_Ignavibacteria_35_20 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
uroporphyrinogen decarboxylase
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
Displaying items 1-30 of 41 in total

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