ggKbase home page

anamox2_curated_scaffold_2068

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_2068_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..476)
DNA (474bp) protein (158aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
5-formyltetrahydrofolate cyclo-ligase Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN48_9GAMM
5,10-methenyltetrahydrofolate synthetase
anamox2_curated_scaffold_2068_2
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(783..1085)
DNA (303bp) protein (101aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003711012
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
anamox2_curated_scaffold_2068_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1082..1300)
DNA (219bp) protein (73aa)
hypothetical protein Tax=Dyella japonica RepID=UPI000363B6EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46802.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anamox2_curated_scaffold_2068_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1357..6000)
DNA (4644bp) protein (1548aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Tax=Shewanella sp. (strain MR-7) RepID=Q0HZZ0_SHESR
Diguanylate cyclase {ECO:0000313|EMBL:GAN45398.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
anamox2_curated_scaffold_2068_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6069..7526
DNA (1458bp) protein (486aa)
aminopeptidase P (EC:3.4.11.9)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003749A10
Proline aminopeptidase P II {ECO:0000313|EMBL:GAN45396.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
anamox2_curated_scaffold_2068_6

Not on your lists

7523..8932
DNA (1410bp) protein (470aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003619EC7
Virulence factor family protein {ECO:0000313|EMBL:EQD73838.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AcvB-like protein
anamox2_curated_scaffold_2068_7
unknown

Not on your lists

9041..9490
DNA (450bp) protein (150aa)

This feature has no annotations

anamox2_curated_scaffold_2068_8
unknown

Not on your lists

9498..10514
DNA (1017bp) protein (339aa)

This feature has no annotations

anamox2_curated_scaffold_2068_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10571..10798)
DNA (228bp) protein (76aa)
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582};; Imidodipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI00034C2304
proline dipeptidase
anamox2_curated_scaffold_2068_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11989..12522)
DNA (534bp) protein (178aa)
hypothetical protein Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F646CE
transmembrane anchor protein
Putative transmembrane anchor protein {ECO:0000313|EMBL:CAQ44157.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
anamox2_curated_scaffold_2068_11
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12780..14594
DNA (1815bp) protein (605aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003649A2B
Uncharacterized protein {ECO:0000313|EMBL:KFN41851.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
hypothetical protein
anamox2_curated_scaffold_2068_12
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14654..15100)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Azotobacter vinelandii RepID=M9Y2E4_AZOVI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK21881.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;"
Displaying 12 items

View Taxonomy