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anamox2_curated_scaffold_5053

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_5053_1
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..302)
DNA (300bp) protein (100aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
Succinyl-diaminopimelate desuccinylase Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UPY7_PSEUP
succinyl-diaminopimelate desuccinylase
anamox2_curated_scaffold_5053_2
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(289..660)
DNA (372bp) protein (124aa)
Uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
transcriptional regulator, Spx/MgsR family
Tax=GWF1_Xanthomonadales_69_6_curated
anamox2_curated_scaffold_5053_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(669..1487)
DNA (819bp) protein (273aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H1_9GAMM
anamox2_curated_scaffold_5053_4
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

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1637..2308
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CDR6_CAPO3
Uncharacterized protein {ECO:0000313|EMBL:KJE95951.1}; species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
anamox2_curated_scaffold_5053_5
unknown

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comp(2997..3671)
DNA (675bp) protein (225aa)

This feature has no annotations

anamox2_curated_scaffold_5053_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4138..4905)
DNA (768bp) protein (256aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Map Tax=Rudaea cellulosilytica RepID=UPI0003752667
Map
anamox2_curated_scaffold_5053_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5226..6125
DNA (900bp) protein (300aa)
30S ribosomal protein S2 Tax=Rudaea cellulosilytica RepID=UPI00036CF3D0
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anamox2_curated_scaffold_5053_8
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6273..7151
DNA (879bp) protein (293aa)
endo-1,4-D-glucanase Tax=Xanthomonas RepID=UPI00036AFFB3
elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
anamox2_curated_scaffold_5053_9
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7217..7693)
DNA (477bp) protein (159aa)
Elongation factor Ts bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
tsf; elongation factor Ts
Tax=GWF1_Xanthomonadales_69_6_curated
Displaying 9 items

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