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anamox2_curated_scaffold_1801

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1801_1
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..274
DNA (273bp) protein (91aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
phosphoribosylaminoimidazole synthetase Tax=Stenotrophomonas maltophilia RepID=UPI0002F68B19
PurM; phosphoribosylaminoimidazole synthetase
anamox2_curated_scaffold_1801_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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271..942
DNA (672bp) protein (224aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylformylglycinamidine synthase, clade II Tax=Rhodanobacter sp. 115 RepID=I4WSS1_9GAMM
anamox2_curated_scaffold_1801_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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998..1714
DNA (717bp) protein (239aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036DE495
Uncharacterized protein {ECO:0000313|EMBL:KGI77227.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
anamox2_curated_scaffold_1801_4
unknown

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1836..2405
DNA (570bp) protein (190aa)

This feature has no annotations

anamox2_curated_scaffold_1801_5
unknown

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2389..3483
DNA (1095bp) protein (365aa)

This feature has no annotations

anamox2_curated_scaffold_1801_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3556..3816)
DNA (261bp) protein (87aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Rhodanobacter fulvus Jip2 RepID=I4VKN0_9GAMM
anamox2_curated_scaffold_1801_7
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4903..5148)
DNA (246bp) protein (82aa)
BolA family transcriptional regulator Tax=Xanthomonas sacchari RepID=UPI0002630F85
BolA family transcriptional regulator
BolA family transcriptional regulator {ECO:0000313|EMBL:AJC47952.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
anamox2_curated_scaffold_1801_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5328..6350
DNA (1023bp) protein (341aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036D6AED
D-arabinose 5-phosphate isomerase
anamox2_curated_scaffold_1801_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6544..7086
DNA (543bp) protein (181aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Tax=Rhodanobacter denitrificans RepID=I4WQZ9_9GAMM
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:AHX14454.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
anamox2_curated_scaffold_1801_10

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7086..7679
DNA (594bp) protein (198aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003627353
Secreted protein containing DUF1239 {ECO:0000313|EMBL:EQD62206.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox2_curated_scaffold_1801_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7684..8256
DNA (573bp) protein (191aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003706AE6
lipopolysaccharide transport periplasmic protein LptA
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:AGG90207.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox2_curated_scaffold_1801_12

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8256..8975
DNA (720bp) protein (240aa)
lipopolysaccharide ABC transporter ATP-binding protein Tax=Rudaea cellulosilytica RepID=UPI00037DE316
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EQD62208.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sugar ABC transporter ATP-binding protein
anamox2_curated_scaffold_1801_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9045..10499
DNA (1455bp) protein (485aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000373911E
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
RNA polymerase subunit sigma-54
anamox2_curated_scaffold_1801_14
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11189..11644
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN45744.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
PTS IIA-like nitrogen-regulatory protein PtsN bin=GWF1_Xanthomonadales_69_6 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
PTS IIA-like nitrogen-regulatory protein PtsN
anamox2_curated_scaffold_1801_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11727..12680
DNA (954bp) protein (318aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
HPr kinase/phosphorylase Tax=Rhodanobacter fulvus Jip2 RepID=I4VKN9_9GAMM
serine kinase
anamox2_curated_scaffold_1801_16

Not on your lists

12674..13549
DNA (876bp) protein (292aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000375F554
ATPase, P-loop-containing {ECO:0000313|EMBL:EQD31716.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
nucleotide-binding protein
anamox2_curated_scaffold_1801_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13563..13955
DNA (393bp) protein (131aa)
Phosphotransferase system, mannose/fructose-specific component IIA Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T2_9GAMM
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:EIL94473.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PTS system fructose IIA component family protein
anamox2_curated_scaffold_1801_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13983..14252
DNA (270bp) protein (90aa)
phosphocarrier protein HPr Tax=Dyella ginsengisoli RepID=UPI000346190C
phosphotransferase system HPr (HPr) family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
anamox2_curated_scaffold_1801_19
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14391..16100
DNA (1710bp) protein (570aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003724D45
phosphoenolpyruvate-protein phosphotransferase
anamox2_curated_scaffold_1801_20
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16265..16705)
DNA (441bp) protein (147aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037C2E00
Glycoprotease {ECO:0000313|EMBL:KJV28742.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
glycoprotease
Displaying 20 items

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