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anamox2_curated_scaffold_1347

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1347_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1079)
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=Xanthomonas translucens DAR61454 RepID=L7GWW0_XANCT
Uncharacterized protein {ECO:0000313|EMBL:KJV33195.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
DNA repair nucleotidyltransferase
anamox2_curated_scaffold_1347_2
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1095..1829)
DNA (735bp) protein (245aa)
Putative uncharacterized protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKJ8_THIDA
Uncharacterized protein {ECO:0000313|EMBL:KJV33196.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SOS cell division inhibitor SulA
anamox2_curated_scaffold_1347_3
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1826..2464)
DNA (639bp) protein (213aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SOS-response transcriptional repressor, LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
LexA repressor (EC:3.4.21.88)
anamox2_curated_scaffold_1347_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2644..3942
DNA (1299bp) protein (433aa)
amidohydrolase Tax=Dyella japonica RepID=UPI0003718938
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHX14178.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
anamox2_curated_scaffold_1347_trna_4
unknown

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comp(4053..4126)
DNA (74bp)
transferRNA Asp
anamox2_curated_scaffold_1347_trna_3
unknown

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comp(4180..4252)
DNA (73bp)
transferRNA Glu
anamox2_curated_scaffold_1347_trna_2
unknown

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comp(4276..4348)
DNA (73bp)
transferRNA Ala
anamox2_curated_scaffold_1347_trna_1
unknown

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comp(4716..4797)
DNA (82bp)
transferRNA Leu
anamox2_curated_scaffold_1347_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4885..7689)
DNA (2805bp) protein (935aa)
TonB-dependent receptor Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S2_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL93763.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor
anamox2_curated_scaffold_1347_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7900..8943
DNA (1044bp) protein (348aa)
Peptidase t2 asparaginase 2 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R9_9GAMM
Peptidase t2 asparaginase 2 {ECO:0000313|EMBL:EIL93760.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peptidase S51 dipeptidase E
anamox2_curated_scaffold_1347_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9121..11454
DNA (2334bp) protein (778aa)
RNAse R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000361CE44
anamox2_curated_scaffold_1347_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11515..12258
DNA (744bp) protein (248aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003603C84
23S rRNA methyltransferase
anamox2_curated_scaffold_1347_9
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(12323..12607)
DNA (285bp) protein (95aa)
Tax=RBG_16_Planctomycetes_64_12_curated
anamox2_curated_scaffold_1347_10
unknown

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comp(12657..13091)
DNA (435bp) protein (145aa)

This feature has no annotations

anamox2_curated_scaffold_1347_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13182..13826)
DNA (645bp) protein (215aa)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051955};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNAse T (EC:3.1.13.-)
Ribonuclease T Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIQ2_9GAMM
anamox2_curated_scaffold_1347_12
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13969..14835
DNA (867bp) protein (289aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003803124
Metallopeptidase {ECO:0000313|EMBL:ETM65629.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
putative zinc metallopeptidase
anamox2_curated_scaffold_1347_13
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14842..15765)
DNA (924bp) protein (308aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI00037F3E8A
Uncharacterized protein {ECO:0000313|EMBL:KFN41554.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
anamox2_curated_scaffold_1347_14
Pseudomonas sp. P482, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15887..16300
DNA (414bp) protein (138aa)
membrane protein Tax=gamma proteobacterium WG36 RepID=UPI00035F3814
Inner membrane protein yphA {ECO:0000313|EMBL:KDO00666.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. P482.;"
DoxX family protein
anamox2_curated_scaffold_1347_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16438..17685)
DNA (1248bp) protein (416aa)
esterase Tax=Dyella ginsengisoli RepID=UPI0003471DFF
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:EIL88902.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
polyhydroxyalkanoate depolymerase, intracellular
anamox2_curated_scaffold_1347_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17807..19087
DNA (1281bp) protein (427aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000380BE47
Glycyl aminopeptidase {ECO:0000313|EMBL:EIL95405.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycyl aminopeptidase
anamox2_curated_scaffold_1347_17
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19091..19720
DNA (630bp) protein (210aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000380BE47
Peptidase M61 {ECO:0000313|EMBL:KGM54027.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
glycyl aminopeptidase
anamox2_curated_scaffold_1347_18
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19805..20989
DNA (1185bp) protein (395aa)
Uncharacterized protein Tax=Rhodanobacter sp. 115 RepID=I4W953_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EYR65910.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
anamox2_curated_scaffold_1347_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21029..21703
DNA (675bp) protein (225aa)
MgtC/SapB transporter Tax=Rhodanobacter fulvus Jip2 RepID=I4VS21_9GAMM
MgtC/SapB transporter {ECO:0000313|EMBL:EIL90012.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
mgtC family protein
anamox2_curated_scaffold_1347_20
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21904..23106
DNA (1203bp) protein (401aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036467E3
Hemolysin D {ECO:0000313|EMBL:KGM56361.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
cation efflux system protein
anamox2_curated_scaffold_1347_21
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23103..25196
DNA (2094bp) protein (698aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000365D546
Uncharacterized protein {ECO:0000313|EMBL:KFN46975.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
acriflavin resistance protein
Displaying 25 items

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