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anamox2_curated_scaffold_1084

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1084_1
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..177
DNA (177bp) protein (59aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035CEBAF
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
nusB; transcription antitermination protein NusB
anamox2_curated_scaffold_1084_2
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198..1169
DNA (972bp) protein (324aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
Thiamine-monophosphate kinase Tax=Rhodanobacter spathiphylli B39 RepID=I4VSH3_9GAMM
thiamine-phosphate kinase
anamox2_curated_scaffold_1084_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1337..1687
DNA (351bp) protein (117aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphatidylglycerophosphatase A-like protein (EC:3.1.3.27)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000376015D
anamox2_curated_scaffold_1084_4
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1662..2573)
DNA (912bp) protein (304aa)
Competence lipoprotein ComL Tax=mine drainage metagenome RepID=T1CGE3_9ZZZZ
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
membrane protein
anamox2_curated_scaffold_1084_5
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2613..3509)
DNA (897bp) protein (299aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE26641.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
anamox2_curated_scaffold_1084_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3640..4395
DNA (756bp) protein (252aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=I4WZI4_9GAMM
uncharacterized protein, YfiH family
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox2_curated_scaffold_1084_7
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4392..4916
DNA (525bp) protein (175aa)
hypothetical protein Tax=Xanthomonas sp. SHU199 RepID=UPI00036F987A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC44406.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
anamox2_curated_scaffold_1084_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4944..5975)
DNA (1032bp) protein (344aa)
Saccharopine dehydrogenase Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ5_9GAMM
Saccharopine dehydrogenase {ECO:0000313|EMBL:KGQ18829.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
saccharopine dehydrogenase
anamox2_curated_scaffold_1084_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7424..7933)
DNA (510bp) protein (170aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EA93BF
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AKC87598.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
anamox2_curated_scaffold_1084_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8195..10777
DNA (2583bp) protein (861aa)
ATP-dependent chaperone ClpB Tax=Rhodanobacter fulvus Jip2 RepID=I4VY21_9GAMM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ATP-dependent chaperone ClpB
anamox2_curated_scaffold_1084_11
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(10952..12298)
DNA (1347bp) protein (449aa)
WD40 domain-containing protein Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EMZ0_STRRM
hypothetical protein
Tax=RBG_13_Actinobacteria_55_18_curated
anamox2_curated_scaffold_1084_12
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12843..13616
DNA (774bp) protein (258aa)
ABC transporter substrate-binding protein Tax=Nevskia ramosa RepID=UPI0003B5FCC2
Periplasmic binding protein {ECO:0000313|EMBL:EIT70015.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
periplasmic binding protein
anamox2_curated_scaffold_1084_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14201..14782
DNA (582bp) protein (194aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002E03B39
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF47030.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anamox2_curated_scaffold_1084_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14883..15854
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YC09_9SPHN
periplasmic substrate-binding protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
anamox2_curated_scaffold_1084_15
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16248..18083)
DNA (1836bp) protein (612aa)
Uncharacterized protein (Fragment) Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NTB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CEH87667.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
anamox2_curated_scaffold_1084_16
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18219..19505
DNA (1287bp) protein (429aa)
Exported cobyrinic acid A,C-diamide synthase Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RPU4_XANCB
cobB; cobyrinic acid a,c-diamide synthase
Exported cobyrinic acid A,C-diamide synthase {ECO:0000313|EMBL:CAP50479.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
anamox2_curated_scaffold_1084_17
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19597..19896
DNA (300bp) protein (100aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003721B8B
Uncharacterized protein {ECO:0000313|EMBL:KFN47292.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein
anamox2_curated_scaffold_1084_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19993..20601
DNA (609bp) protein (203aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000362D40C
Uncharacterized protein {ECO:0000313|EMBL:EIL92312.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
anamox2_curated_scaffold_1084_19
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20786..22552
DNA (1767bp) protein (589aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KFN51238.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Aspartate--tRNA ligase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
aspartyl-tRNA synthetase
anamox2_curated_scaffold_1084_20
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22545..23234
DNA (690bp) protein (230aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003677C25
Uncharacterized protein {ECO:0000313|EMBL:KFN47296.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
lysophospholipase
anamox2_curated_scaffold_1084_21
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23310..23882
DNA (573bp) protein (191aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
Crossover junction endodeoxyribonuclease RuvC Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L155_FRAAD
crossover junction endodeoxyribonuclease RuvC
anamox2_curated_scaffold_1084_22
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23879..24436
DNA (558bp) protein (186aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Holliday junction DNA helicase RuvA Tax=Dyella ginsengisoli RepID=UPI00034834EC
Holliday junction DNA helicase RuvA
anamox2_curated_scaffold_1084_23

Not on your lists

24452..26341
DNA (1890bp) protein (630aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037D255D
Potassium transporter {ECO:0000313|EMBL:EQD65880.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
trkD; potassium transport protein Kup
anamox2_curated_scaffold_1084_24

Not on your lists

26463..27239
DNA (777bp) protein (259aa)
Holliday junction DNA helicase RuvB (Fragment) Tax=mine drainage metagenome RepID=T1BJ62_9ZZZZ
Holliday junction DNA helicase RuvB {ECO:0000313|EMBL:EQD53209.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Holliday junction DNA helicase RuvB
Displaying 24 items

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