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anamox2_curated_scaffold_1456

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1456_1
unknown

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comp(2..439)
DNA (438bp) protein (146aa)

This feature has no annotations

anamox2_curated_scaffold_1456_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(842..3031)
DNA (2190bp) protein (730aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000375B6D3
Prolyl oligopeptidase {ECO:0000313|EMBL:EIL89991.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
prolyl oligopeptidase
anamox2_curated_scaffold_1456_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3238..3627
DNA (390bp) protein (130aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037B977C
Uncharacterized protein {ECO:0000313|EMBL:GAN45341.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
transcriptional regulator
anamox2_curated_scaffold_1456_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3630..5282
DNA (1653bp) protein (551aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000368A7A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16061.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
anamox2_curated_scaffold_1456_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5762..6448
DNA (687bp) protein (229aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSY2_9GAMM
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EIM02574.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
anamox2_curated_scaffold_1456_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6432..7724
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003759E98
histidine kinase
anamox2_curated_scaffold_1456_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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8017..8766
DNA (750bp) protein (250aa)
Deoxyribose-phosphate aldolase Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL6_9GAMM
deoxyribose-phosphate aldolase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
anamox2_curated_scaffold_1456_8
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8763..10082
DNA (1320bp) protein (440aa)
thymidine phosphorylase (EC:2.4.2.4)
Thymidine phosphorylase Tax=Rhodanobacter denitrificans RepID=I4WYJ2_9GAMM
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
anamox2_curated_scaffold_1456_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10087..10506)
DNA (420bp) protein (140aa)
CMP/dCMP deaminase zinc-binding Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEK0_XANP2
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:ABS66443.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
anamox2_curated_scaffold_1456_10
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10503..11420)
DNA (918bp) protein (306aa)
branched-chain amino acid aminotransferase Tax=Arenimonas oryziterrae RepID=UPI0003B64E4E
branched-chain amino acid aminotransferase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
anamox2_curated_scaffold_1456_11
unknown

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comp(11476..12024)
DNA (549bp) protein (183aa)

This feature has no annotations

anamox2_curated_scaffold_1456_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12272..13969
DNA (1698bp) protein (566aa)
asparagine synthase, glutamine-hydrolyzing (EC:6.3.5.4)
Asparagine synthetase Tax=Rhodanobacter spathiphylli B39 RepID=I4VWM8_9GAMM
Asparagine synthetase B {ECO:0000313|EMBL:EIL99303.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
anamox2_curated_scaffold_1456_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14015..14854)
DNA (840bp) protein (280aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035D0998
anamox2_curated_scaffold_1456_14
unknown

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comp(15005..15193)
DNA (189bp) protein (63aa)

This feature has no annotations

anamox2_curated_scaffold_1456_15
unknown

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comp(15190..15456)
DNA (267bp) protein (89aa)

This feature has no annotations

anamox2_curated_scaffold_1456_16
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15538..16092
DNA (555bp) protein (185aa)
Uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
anamox2_curated_scaffold_1456_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16122..17765)
DNA (1644bp) protein (548aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase Tax=Rhodanobacter denitrificans RepID=M4NE92_9GAMM
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG88247.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox2_curated_scaffold_1456_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17842..18975)
DNA (1134bp) protein (378aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=M4NAM6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87544.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox2_curated_scaffold_1456_19
unknown

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comp(19017..19493)
DNA (477bp) protein (159aa)

This feature has no annotations

anamox2_curated_scaffold_1456_20
unknown

Not on your lists

20332..21186
DNA (855bp) protein (285aa)

This feature has no annotations

Displaying 20 items

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