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anamox2_curated_scaffold_3013

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_3013_1
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..504
DNA (504bp) protein (168aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037FC4CB
RND family efflux transporter MFP subunit
Uncharacterized protein {ECO:0000313|EMBL:KFN43709.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
anamox2_curated_scaffold_3013_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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551..1240
DNA (690bp) protein (230aa)
ABC transporter Tax=Rudaea cellulosilytica RepID=UPI0003647C27
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHX15846.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
anamox2_curated_scaffold_3013_3
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1292..2452
DNA (1161bp) protein (387aa)
ABC transporter permease Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CKE4_XANCA
Membrane protein {ECO:0000313|EMBL:KGM52861.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
ABC transporter permease
anamox2_curated_scaffold_3013_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2464..3774
DNA (1311bp) protein (437aa)
Uncharacterized protein Tax=Rhodanobacter fulvus Jip2 RepID=I4VS47_9GAMM
Membrane protein {ECO:0000313|EMBL:KGI77128.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
membrane protein
anamox2_curated_scaffold_3013_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3704..4690)
DNA (987bp) protein (329aa)
DMT(Drug/metabolite transporter) superfamily permease Tax=Rhodanobacter denitrificans RepID=M4NHK4_9GAMM
DMT(drug/metabolite transporter) superfamily permease
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:AGG90384.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox2_curated_scaffold_3013_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4757..5032)
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Rhodanobacter sp. 115 RepID=I4W860_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95651.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
anamox2_curated_scaffold_3013_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5122..5454
DNA (333bp) protein (111aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein Tax=Rhodanobacter spathiphylli B39 RepID=I4W277_9GAMM
Ferredoxin {ECO:0000313|EMBL:GAN45350.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
anamox2_curated_scaffold_3013_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5462..7309)
DNA (1848bp) protein (616aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037BFA38
Potassium transporter TrkA {ECO:0000313|EMBL:KGI77161.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
di-/tricarboxylate transporter
anamox2_curated_scaffold_3013_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7600..8301)
DNA (702bp) protein (234aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036EB3FA
tRNA (guanine-N7)-methyltransferase
anamox2_curated_scaffold_3013_10
unknown

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comp(8481..8795)
DNA (315bp) protein (105aa)

This feature has no annotations

anamox2_curated_scaffold_3013_trna_1
unknown

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11139..11209
DNA (71bp)
transferRNA Gly
Displaying 11 items

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