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anamox2_curated_scaffold_2270

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_2270_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..659
DNA (657bp) protein (219aa)
ABC transporter ATP-binding protein Tax=Rudaea cellulosilytica RepID=UPI000368A637
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM55168.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
putative ABC transporter ATP-binding protein
anamox2_curated_scaffold_2270_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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733..1548
DNA (816bp) protein (272aa)
Orotidine 5'-phosphate decarboxylase Tax=Rhodanobacter denitrificans RepID=M4NEI5_9GAMM
orotidine 5''-phosphate decarboxylase, subfamily 2
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
anamox2_curated_scaffold_2270_3
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1549..2076)
DNA (528bp) protein (176aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
peptide deformylase Tax=Rudaea cellulosilytica RepID=UPI00035E55D4
anamox2_curated_scaffold_2270_4
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2220..4172
DNA (1953bp) protein (651aa)
peptide transporter Tax=Arenimonas oryziterrae RepID=UPI0003B7BA95
Peptide transporter {ECO:0000313|EMBL:KFN45019.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
oliA; oligopeptide transporter
anamox2_curated_scaffold_2270_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4197..5111)
DNA (915bp) protein (305aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036947D1
Putative glycosyltransferase {ECO:0000313|EMBL:EIL87269.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glycosyl transferase family 2
anamox2_curated_scaffold_2270_6
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5120..6979)
DNA (1860bp) protein (620aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036054E9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ27859.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
anamox2_curated_scaffold_2270_7
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7003..7869)
DNA (867bp) protein (289aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000360EC6E
methyltransferase domain protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
anamox2_curated_scaffold_2270_8
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7869..9068)
DNA (1200bp) protein (400aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000382AE37
ABC transporter
Tax=BJP_08E140C01_Xanthomonadales_64_42
anamox2_curated_scaffold_2270_9
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9065..9847)
DNA (783bp) protein (261aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000377FB06
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
ABC transporter
anamox2_curated_scaffold_2270_10
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10309..11193)
DNA (885bp) protein (295aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037348C7
PpiC-type peptidyl-prolyl cis-trans isomerase
anamox2_curated_scaffold_2270_11
unknown

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comp(11467..11991)
DNA (525bp) protein (175aa)

This feature has no annotations

anamox2_curated_scaffold_2270_12
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13817..15373)
DNA (1557bp) protein (519aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036E23A0
Uncharacterized protein {ECO:0000313|EMBL:KFI20253.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
hypothetical protein
anamox2_curated_scaffold_2270_13
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15538..15954)
DNA (417bp) protein (139aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036D4B59
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
anamox2_curated_scaffold_2270_14
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15944..18319)
DNA (2376bp) protein (792aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003679888
General secretion pathway protein GspD {ECO:0000313|EMBL:KJV33775.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
type II and III secretion system protein:NolW-like
anamox2_curated_scaffold_2270_15
unknown

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comp(18334..19044)
DNA (711bp) protein (237aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000363FBF0
anamox2_curated_scaffold_2270_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19041..19649)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000368C457
General secretion pathway protein M {ECO:0000313|EMBL:GAN45826.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
general secretion pathway protein GspM
anamox2_curated_scaffold_2270_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19636..20061)
DNA (426bp) protein (142aa)
Putative transmembrane protein Tax=Variovorax paradoxus (strain S110) RepID=C5CSH1_VARPS
Putative transmembrane protein {ECO:0000313|EMBL:ACS18069.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
CheA signal transduction histidine kinase
Displaying 17 items

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