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anamox2_curated_scaffold_2153

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_2153_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1257)
DNA (1257bp) protein (419aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
valyl-tRNA synthetase (EC:6.1.1.9)
valyl-tRNA synthetase Tax=Rudaea cellulosilytica RepID=UPI000375645D
anamox2_curated_scaffold_2153_2
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1361..1996
DNA (636bp) protein (212aa)
upp; uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox2_curated_scaffold_2153_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2020..2808
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Rhodanobacter sp. 115 RepID=I4W9G3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96104.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
anamox2_curated_scaffold_2153_4
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2829..3251)
DNA (423bp) protein (141aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000377E406
DNA polymerase III subunit chi {ECO:0000313|EMBL:KJV28738.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
DNA polymerase III subunit chi
anamox2_curated_scaffold_2153_5
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3251..3661)
DNA (411bp) protein (137aa)
membrane protein Tax=Xanthomonas sp. M97 RepID=UPI0003B659C9
Membrane protein {ECO:0000313|EMBL:KHD63406.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
hypothetical protein
anamox2_curated_scaffold_2153_6
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3663..5150)
DNA (1488bp) protein (496aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003690106
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
cytosol aminopeptidase
anamox2_curated_scaffold_2153_7
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5309..6460
DNA (1152bp) protein (384aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003721958
Uncharacterized protein {ECO:0000313|EMBL:KFN47418.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
permease
anamox2_curated_scaffold_2153_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6457..7587
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036A7A26
putative permease
Putative permease {ECO:0000313|EMBL:AGG90308.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox2_curated_scaffold_2153_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7649..8752)
DNA (1104bp) protein (368aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Epoxyqueuosine reductase Tax=Dyella ginsengisoli RepID=UPI000348B801
epoxyqueuosine reductase
anamox2_curated_scaffold_2153_10
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8929..10059
DNA (1131bp) protein (377aa)
Putative Acyltransferase Tax=Paenibacillus sp. P22 RepID=T2LM53_9BACL
Putative Acyltransferase {ECO:0000313|EMBL:CDN43082.1}; Flags: Fragment;; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
putative Acyltransferase
anamox2_curated_scaffold_2153_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10159..11286
DNA (1128bp) protein (376aa)
twitching motility protein PilT Tax=Dyella japonica RepID=UPI0002F580EE
Twitching motility protein PilT {ECO:0000313|EMBL:GAN45294.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
twitching motility protein PilT
anamox2_curated_scaffold_2153_12
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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12116..12919
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=Sphingobium quisquiliarum P25 RepID=T0GA38_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KDA53600.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
anamox2_curated_scaffold_2153_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12905..13858)
DNA (954bp) protein (318aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035C1A9D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47194.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anamox2_curated_scaffold_2153_14

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comp(14695..15642)
DNA (948bp) protein (316aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase catalytic subunit Tax=mine drainage metagenome RepID=T1CEU3_9ZZZZ
Aspartate carbamoyltransferase catalytic subunit {ECO:0000313|EMBL:EQD65365.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anamox2_curated_scaffold_2153_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15660..16088)
DNA (429bp) protein (143aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Holliday junction resolvase Tax=Xanthomonas sacchari RepID=UPI00026312A3
Holliday junction resolvase
anamox2_curated_scaffold_2153_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16072..16635)
DNA (564bp) protein (188aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037433A8
UPF0301 protein MBSD_1837 {ECO:0000256|HAMAP-Rule:MF_00758}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
anamox2_curated_scaffold_2153_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16700..17560)
DNA (861bp) protein (287aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI000349B696
Energy transducer TonB {ECO:0000313|EMBL:GAN45290.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
energy transducer TonB
anamox2_curated_scaffold_2153_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17557..18513)
DNA (957bp) protein (319aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glutathione synthetase (EC:6.3.2.3)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003766CA9
anamox2_curated_scaffold_2153_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18902..19300
DNA (399bp) protein (133aa)
Response regulator receiver protein Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQ98_PSEUP
Pilus assembly protein PilG {ECO:0000313|EMBL:GAN45288.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
response regulator receiver protein
anamox2_curated_scaffold_2153_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19415..19963
DNA (549bp) protein (183aa)
Chemotaxis protein CheW {ECO:0000313|EMBL:GAN45286.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Chemotaxis signal transduction protein bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
chemotaxis protein CheW
anamox2_curated_scaffold_2153_21
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20028..22052
DNA (2025bp) protein (675aa)
Methyl-accepting chemotaxis sensory transducer Tax=mine drainage metagenome RepID=T1B5T6_9ZZZZ
Chemotaxis protein {ECO:0000313|EMBL:GAN45285.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
methyl-accepting chemotaxis protein
anamox2_curated_scaffold_2153_22
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22036..22899)
DNA (864bp) protein (288aa)
hypothetical protein Tax=Pseudomonas aeruginosa RepID=UPI000358D5C5
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
anamox2_curated_scaffold_2153_23

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23092..26211
DNA (3120bp) protein (1040aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI0003455B0B
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:EQD27664.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
chemotaxis protein histidine kinase-like protein
Displaying 23 items

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