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anamox2_curated_scaffold_1648

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1648_1
unknown

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1..219
DNA (219bp) protein (73aa)

This feature has no annotations

anamox2_curated_scaffold_1648_2
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(265..2733)
DNA (2469bp) protein (823aa)
serine/threonine protein kinase (EC:2.7.11.1)
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZBU7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM50885.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
anamox2_curated_scaffold_1648_3
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2764..3336)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036FEAA9
Uncharacterized protein {ECO:0000313|EMBL:EAQ78346.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
ECF subfamily RNA polymerase sigma-24 factor
anamox2_curated_scaffold_1648_4

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comp(3451..5574)
DNA (2124bp) protein (708aa)
Marine sediment metagenome DNA, contig: S01H4_L06313 {ECO:0000313|EMBL:GAG76591.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox2_curated_scaffold_1648_5
unknown

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comp(5751..6080)
DNA (330bp) protein (110aa)

This feature has no annotations

anamox2_curated_scaffold_1648_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6197..7111
DNA (915bp) protein (305aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI0003628F5D
general secretion pathway protein C
General secretion pathway protein C {ECO:0000313|EMBL:ACL71323.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
anamox2_curated_scaffold_1648_7
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7111..9210
DNA (2100bp) protein (700aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000370BA2B
general secretion pathway protein D
Tax=BJP_08E140C01_Xanthomonadales_64_42
anamox2_curated_scaffold_1648_8
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9207..10694
DNA (1488bp) protein (496aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000373D432
general secretory pathway protein E
Tax=BJP_08E140C01_Xanthomonadales_64_42
anamox2_curated_scaffold_1648_9
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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10792..12006
DNA (1215bp) protein (405aa)
General secretion pathway protein F Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DGK4_9GAMM
general secretion pathway protein F
General secretory pathway component, cryptic {ECO:0000313|EMBL:CDI03991.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
anamox2_curated_scaffold_1648_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12146..12820
DNA (675bp) protein (225aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003678E19
ABC transporter {ECO:0000313|EMBL:KGI78798.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cell division ATP-binding protein FtsE
anamox2_curated_scaffold_1648_11
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12817..13815
DNA (999bp) protein (333aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003626F4D
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
ftsX; Probable cell division protein FtsX
anamox2_curated_scaffold_1648_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13812..14675
DNA (864bp) protein (288aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain Tax=Rhodanobacter denitrificans RepID=I4WX88_9GAMM
Histidine kinase {ECO:0000313|EMBL:GAN45508.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
response regulator containing a CheY-like receiver domain and a GGDEF domain
anamox2_curated_scaffold_1648_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14672..15382
DNA (711bp) protein (237aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase Tax=Rhodanobacter denitrificans RepID=I4WX87_9GAMM
anamox2_curated_scaffold_1648_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15617..16477
DNA (861bp) protein (287aa)
RNA polymerase sigma 70 Tax=Dyella ginsengisoli RepID=UPI00034DE003
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
RNA polymerase factor sigma-32
anamox2_curated_scaffold_1648_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16563..17948)
DNA (1386bp) protein (462aa)
Uncharacterized protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD68_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL97409.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 15 items

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