ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

anamox2_curated_scaffold_2960_10

Organism: anamox2_Xanthomonadales_70_8_curated

near complete RP 50 / 55 BSCG 48 / 51 ASCG 9 / 38
Location: comp(10044..10598)

Top 3 Functional Annotations

Value Algorithm Source
Prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU20_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 177.0
  • Bit_score: 111
  • Evalue 7.20e-22
Pilus biosynthesis protein {ECO:0000313|EMBL:GAN45217.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 178.0
  • Bit_score: 137
  • Evalue 1.30e-29
type 4 fimbrial pilin similarity KEGG
DB: KEGG
  • Identity: 31.2
  • Coverage: 189.0
  • Bit_score: 102
  • Evalue 1.20e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGTGCCAGCGCCAGCCCCCGCGTGGATTCACCCTGGTCGAACTCATGTGCGTGCTCGTCCTCGCCGCGGTCCTCGCCGGGGTCGCACTGCCGTCGTTCGGCGGCCTGGTCGGCAACACACGCAGCACCACGGCGCGGCTGACCCTCGCCGGCGCGTTCAATACCGCGCGCATCAGCGCGGTATCACAAGGCCGCCACGTGGTGCTGTGTCCGAGCGCCAACCAGCAGGTGTGCGACGACGGCGAGCAGTGGCAGCACGGCTGGGTTGCCTTCGTCGACGCCGACCATGACCGCGAGCTGGGTGCCGGCGACACCGTGCTCACGCTGCAGCAGGCGCTGCCGGCGGGCACCGCGGTGGTCGGCAGCAGCGCCCGCAGCCGCATCAACTACCAGCCCGACGGCAGCGCCGGCGGCAGCAACGCCACCCTGACCATCTGCGACCGGTCAGGCGGCGCGGCCAGCGCGCGCACGCTCGTGATCAGCGCAAGCGGGCGCGTCCGCTATGGCACCGCCAGTCCCGCGCACATCGCGCAGTGCCTGGCGGTGGCCGGCTGA
PROTEIN sequence
Length: 185
MCQRQPPRGFTLVELMCVLVLAAVLAGVALPSFGGLVGNTRSTTARLTLAGAFNTARISAVSQGRHVVLCPSANQQVCDDGEQWQHGWVAFVDADHDRELGAGDTVLTLQQALPAGTAVVGSSARSRINYQPDGSAGGSNATLTICDRSGGAASARTLVISASGRVRYGTASPAHIAQCLAVAG*