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anamox3_curated_scaffold_4556

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_4556_1
unknown

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comp(45..764)
DNA (720bp) protein (240aa)

This feature has no annotations

anamox3_curated_scaffold_4556_2
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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1490..1708
DNA (219bp) protein (73aa)
translation initiation factor 1; K02518 translation initiation factor IF-1 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
infA; initiation factor IF-I
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_4556_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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1724..1840
DNA (117bp) protein (39aa)
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
50S ribosomal protein L36
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_4556_4
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

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1854..2231
DNA (378bp) protein (126aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
30S ribosomal protein S13
anamox3_curated_scaffold_4556_5
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

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2278..2664
DNA (387bp) protein (129aa)
rpsK; Ribosomal protein S11; K02948 small subunit ribosomal protein S11 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
30S ribosomal protein S11
anamox3_curated_scaffold_4556_6
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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2731..3744
DNA (1014bp) protein (338aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
rpoA; DNA-directed RNA polymerase subunit alpha
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_4556_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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3748..4479
DNA (732bp) protein (244aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
50S ribosomal protein L17
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_4556_8
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4563..4910
DNA (348bp) protein (116aa)
ysxC; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
engB; ribosome biogenesis GTP-binding protein YsxC
anamox3_curated_scaffold_4556_9
uncultured Chlorobi bacterium, Chlorobi, Bacteria

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4920..5168
DNA (249bp) protein (83aa)
ysxC; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
GTP-binding protein {ECO:0000313|EMBL:BAL55312.1}; species="Bacteria; Chlorobi; environmental samples.;" source="uncultured Chlorobi bacterium.;"
anamox3_curated_scaffold_4556_10
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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5194..5646
DNA (453bp) protein (151aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] bin=BACIGN_2 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=BACIGN_2 organism_group=Unknown_CP
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
anamox3_curated_scaffold_4556_11
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5839..6177
DNA (339bp) protein (113aa)
Molybdenum-binding protein Tax=Flavobacterium sp. CF136 RepID=J3C695_9FLAO
ModE family transcriptional regulator {ECO:0000313|EMBL:KIA87195.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
ModE family transcriptional regulator
anamox3_curated_scaffold_4556_12
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6196..7476
DNA (1281bp) protein (427aa)
hypothetical protein Tax=Flavobacterium sp. WG21 RepID=UPI00034D7842
TonB-dependent receptor {ECO:0000313|EMBL:KFF20265.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
TonB-dependent receptor
Displaying 12 items

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