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anamox3_curated_scaffold_1684

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1684_1
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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2..706
DNA (705bp) protein (235aa)
4-aminobutyrate aminotransferase bin=GWF2_Planctomycete_41_51 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
4-aminobutyrate aminotransferase
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
anamox3_curated_scaffold_1684_2
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

747..1979
DNA (1233bp) protein (411aa)
yodQ; putative metallohydrolase YodQ (EC:3.-.-.-)
acetylornithine deacetylase bin=GWF2_Planctomycete_41_51 species=Bacillus sp. 1NLA3E genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox3_curated_scaffold_1684_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

1996..3027
DNA (1032bp) protein (344aa)
putative L-iditol 2-dehydrogenase (EC:1.1.1.14)
Sorbitol dehydrogenase bin=GWF2_Planctomycete_41_51 species=Vibrio nigripulchritudo genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox3_curated_scaffold_1684_4
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(3068..3661)
DNA (594bp) protein (198aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00036B9F28
mltE; Soluble lytic murein transglycosylase
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:ACD82159.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
anamox3_curated_scaffold_1684_5
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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3758..5917
DNA (2160bp) protein (720aa)
Primosomal protein N' bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
PriA; primosomal protein N'
Tax=GWF2_Lentisphaerae_57_35_curated
anamox3_curated_scaffold_1684_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(6026..6838)
DNA (813bp) protein (271aa)
Uncharacterized protein, putative amidase bin=GWF2_Lentisphaerae_49_21 species=[Ruminococcus] torques genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Uncharacterized protein, putative amidase
Tax=GWF2_Lentisphaerae_49_21_curated
anamox3_curated_scaffold_1684_7
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(6942..8072)
DNA (1131bp) protein (377aa)
Glycosyl transferase, group 1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYN2_9BACT
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EES52317.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
group 1 glycosyl transferase
anamox3_curated_scaffold_1684_8
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(8069..8848)
DNA (780bp) protein (260aa)
Methyltransferase type 11 Tax=Oscillochloris trichoides DG-6 RepID=E1IHX7_9CHLR
Methyltransferase type 11 {ECO:0000313|EMBL:EFO79252.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
type 11 methyltransferase
anamox3_curated_scaffold_1684_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8886..10439)
DNA (1554bp) protein (518aa)
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase {ECO:0000313|EMBL:ABG04924.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABG04924.1};; EC=4.2.1.75 {ECO:0000313|EMBL:ABG04924.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK4_RUBXD
anamox3_curated_scaffold_1684_10
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10443..10838)
DNA (396bp) protein (132aa)
PAS domain S-box bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
histidine kinase
Tax=CG_Delta_03
anamox3_curated_scaffold_1684_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10835..11785)
DNA (951bp) protein (317aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000256|SAAS:SAAS00018413};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Porphobilinogen deaminase Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z869_AZOL4
hemC; hydroxymethylbilane synthase
anamox3_curated_scaffold_1684_12
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11782..12831)
DNA (1050bp) protein (350aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Glutamyl-tRNA reductase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLS7_THEM7
glutamyl-tRNA reductase
anamox3_curated_scaffold_1684_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12847..13665)
DNA (819bp) protein (273aa)
Cytochrome c assembly protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X5_9BACT
Cytochrome c assembly protein {ECO:0000313|EMBL:EDY18178.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cytochrome C biogenesis protein CcsB
anamox3_curated_scaffold_1684_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14670..15383)
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDT5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61826.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
anamox3_curated_scaffold_1684_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15380..15982)
DNA (603bp) protein (201aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XNY9_9BACT
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EEF58455.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
anamox3_curated_scaffold_1684_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16038..17210)
DNA (1173bp) protein (391aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
S-adenosyl-L-homocysteine hydrolase Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4751F
Displaying 16 items

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