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anamox3_curated_scaffold_2652

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2652_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2..1702)
DNA (1701bp) protein (567aa)
2-alkenal reductase {ECO:0000313|EMBL:EEF57970.1}; EC=1.3.1.74 {ECO:0000313|EMBL:EEF57970.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
2-alkenal reductase Tax=Pedosphaera parvula Ellin514 RepID=B9XQE6_9BACT
dnaK; chaperone protein DnaK
anamox3_curated_scaffold_2652_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1877..2746
DNA (870bp) protein (290aa)
RNA polymerase sigma factor Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q1_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
anamox3_curated_scaffold_2652_3
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

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2752..3279
DNA (528bp) protein (176aa)
Adenine phosphoribosyltransferase bin=GWA2_Elusi_like_61_42 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
adenine phosphoribosyltransferase
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
anamox3_curated_scaffold_2652_4
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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3279..3938
DNA (660bp) protein (220aa)
Putative L,D-transpeptidase ErfK/SrfK {ECO:0000313|EMBL:KIA76126.1}; EC=2.-.-.- {ECO:0000313|EMBL:KIA76126.1};; species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
Putative L,D-transpeptidase ErfK/SrfK Tax=Parachlamydia acanthamoebae RepID=F8KWL3_PARAV
erfK; L,D-transpeptidase ErfK/SrfK
anamox3_curated_scaffold_2652_5
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4081..4530
DNA (450bp) protein (150aa)
UPF0234 protein Clocel_3875 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SKW9_CLOC7
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_2652_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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4550..6352
DNA (1803bp) protein (601aa)
metX; homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase Tax=Rhodopirellula baltica SH28 RepID=K5DJ39_RHOBT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
anamox3_curated_scaffold_2652_7
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6401..7618)
DNA (1218bp) protein (406aa)
Major facilitator superfamily MFS_1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN02_9BACT
arabinose efflux permease
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_2652_8

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comp(7740..9254)
DNA (1515bp) protein (505aa)
2-alkenal reductase Tax=Pedosphaera parvula Ellin514 RepID=B9XDT6_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48359.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
serine protease
anamox3_curated_scaffold_2652_9
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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9339..9767
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30ZN7_DESDG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB38859.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
anamox3_curated_scaffold_2652_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9802..10695)
DNA (894bp) protein (298aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha Tax=Pedosphaera parvula Ellin514 RepID=B9XII4_9BACT
succinyl-CoA synthetase subunit alpha
anamox3_curated_scaffold_2652_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10706..11707)
DNA (1002bp) protein (334aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Succinyl-CoA ligase [ADP-forming] subunit beta Tax=Pedosphaera parvula Ellin514 RepID=B9XII3_9BACT
sucC1; succinyl-CoA synthetase subunit beta
anamox3_curated_scaffold_2652_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12023..13024)
DNA (1002bp) protein (334aa)
Binding-protein-dependent transport systems inner membrane component Tax=Chthoniobacter flavus Ellin428 RepID=B4D3K3_9BACT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EDY18833.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
anamox3_curated_scaffold_2652_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(13041..14204)
DNA (1164bp) protein (388aa)
Efflux transporter, RND family, MFP subunit Tax=Chthoniobacter flavus Ellin428 RepID=B4D909_9BACT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDY17054.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RND family efflux transporter mfp subunit
Displaying 13 items

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