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anamox3_curated_scaffold_4182

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_4182_1
unknown

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comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

anamox3_curated_scaffold_4182_2
CG_Omnitr_07, Omnitrophica, Bacteria

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comp(106..1278)
DNA (1173bp) protein (391aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000362C7A0
8-amino-7-oxononanoate synthase
Tax=CG_Omnitr_07
anamox3_curated_scaffold_4182_3
unknown

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comp(1304..1873)
DNA (570bp) protein (190aa)

This feature has no annotations

anamox3_curated_scaffold_4182_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1899..3437)
DNA (1539bp) protein (513aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
2-isopropylmalate synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XB18_9BACT
leuA; Isopropylmalate synthase
anamox3_curated_scaffold_4182_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3678..4223)
DNA (546bp) protein (182aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Shikimate kinase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK63_AZOSU
shikimate kinase
anamox3_curated_scaffold_4182_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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4905..5927
DNA (1023bp) protein (341aa)
Peptide chain release factor 2 bin=GWF2_Lentisphaerae_57_35 species=Exiguobacterium sp. genus=Exiguobacterium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
prfB; protein chain release factor B
Tax=GWF2_Lentisphaerae_57_35_curated
anamox3_curated_scaffold_4182_7
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6012..6800
DNA (789bp) protein (263aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
trpC; Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase Tax=Rhizobium sp. (strain NGR234) RepID=TRPC_RHISN
anamox3_curated_scaffold_4182_trna_1
unknown

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6989..7062
DNA (74bp)
transferRNA Pro
anamox3_curated_scaffold_4182_8
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7092..7607
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JG72_9GAMM
phosphatidylglycerophosphatase A
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_4182_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7638..8012
DNA (375bp) protein (125aa)
Radical SAM domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIR1_9BACT
radical SAM protein
Tax=GWF2_Verrucomicrobia_62_7_curated
Displaying 10 items

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