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anamox3_curated_scaffold_4893

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_4893_1

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comp(3..1004)
DNA (1002bp) protein (334aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU23_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:KKL65938.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HEAT repeat-containing PBS lyase
anamox3_curated_scaffold_4893_2
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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1852..3372
DNA (1521bp) protein (507aa)
Glycoside hydrolase family 37 bin=GWF2_Lentisphaerae_50_93 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
gly63A; a-glycosidase-like protein
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
anamox3_curated_scaffold_4893_3
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

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3783..6299
DNA (2517bp) protein (839aa)
type iii restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Type III restriction protein res subunit {ECO:0000313|EMBL:KKU60743.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
type III restriction protein res subunit
anamox3_curated_scaffold_4893_4
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6296..7003
DNA (708bp) protein (236aa)
Topoisomerase DNA binding C4 zinc finger {ECO:0000313|EMBL:GAM11102.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
DNA topoisomerase, type IA, zn finger domain protein bin=GWF2_Lentisphaerae_49_21 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
DNA topoisomerase type IA Zn finger domain-containing protein
anamox3_curated_scaffold_4893_5
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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6997..7089
DNA (93bp) protein (31aa)
Restriction modification system DNA specificity domain Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TK37_CALNY
N-6 DNA methylase
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ADR19313.1}; species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;" source="Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 /; Yu37-1).;"
Displaying 5 items

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