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anamox3_curated_scaffold_2265

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2265_1
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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651..1922
DNA (1272bp) protein (424aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000378A295
putative oxidoreductase
Tax=RBG_13_Spirochaetes_68_11_curated
anamox3_curated_scaffold_2265_2
unknown

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1934..3241
DNA (1308bp) protein (436aa)
Alpha-galactosidase
anamox3_curated_scaffold_2265_3

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3478..4308
DNA (831bp) protein (277aa)
hypothetical protein Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI000365268C
Marine sediment metagenome DNA, contig: S03H2_S15230 {ECO:0000313|EMBL:GAH62792.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
xylose isomerase
anamox3_curated_scaffold_2265_4

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4305..5132
DNA (828bp) protein (276aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036577E1
Marine sediment metagenome DNA, contig: S01H4_C01852 {ECO:0000313|EMBL:GAG73617.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
xylose isomerase
anamox3_curated_scaffold_2265_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5308..5748
DNA (441bp) protein (147aa)
UbiD family decarboxylase Tax=Pedosphaera parvula Ellin514 RepID=B9XCT0_9BACT
UbiD family decarboxylase {ECO:0000313|EMBL:EEF62276.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
UbiD family decarboxylase
anamox3_curated_scaffold_2265_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5873..6811
DNA (939bp) protein (313aa)
UbiD family decarboxylase Tax=Pedosphaera parvula Ellin514 RepID=B9XCT0_9BACT
UbiD family decarboxylase {ECO:0000313|EMBL:EEF62276.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase
anamox3_curated_scaffold_2265_7
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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6998..7255
DNA (258bp) protein (86aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_66_18 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox3_curated_scaffold_2265_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7375..7995)
DNA (621bp) protein (207aa)
HNH endonuclease Tax=Pedosphaera parvula Ellin514 RepID=B9XRB4_9BACT
HNH endonuclease {ECO:0000313|EMBL:EEF57601.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
mcrA; Restriction endonuclease, McrA/HNH family
anamox3_curated_scaffold_2265_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8597..9829)
DNA (1233bp) protein (411aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase subunit D Tax=Pedosphaera parvula Ellin514 RepID=B9XHH8_9BACT
nuoD; NADH dehydrogenase subunit D
anamox3_curated_scaffold_2265_10
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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10064..11116
DNA (1053bp) protein (351aa)
Oxidoreductase domain protein Tax=Opitutaceae bacterium TAV5 RepID=H1IYJ9_9BACT
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AHF89641.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
anamox3_curated_scaffold_2265_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(11147..11980)
DNA (834bp) protein (278aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Prolipoprotein diacylglyceryl transferase Tax=Pedosphaera parvula Ellin514 RepID=B9XPW5_9BACT
prolipoprotein diacylglyceryl transferase
anamox3_curated_scaffold_2265_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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12312..14090
DNA (1779bp) protein (593aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Tax=Chthoniobacter flavus Ellin428 RepID=B4DBR5_9BACT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein
anamox3_curated_scaffold_2265_13
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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14248..16947
DNA (2700bp) protein (900aa)
acnA; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
Aconitate hydratase 1 Tax=unclassified Opitutaceae RepID=H1IRK4_9BACT
anamox3_curated_scaffold_2265_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(17117..18238)
DNA (1122bp) protein (374aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV Tax=Caldithrix abyssi DSM 13497 RepID=H1XRX8_9BACT
Tax=RBG_16_RIF_CHLX_72_14_curated
anamox3_curated_scaffold_2265_15
unknown

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comp(18276..18719)
DNA (444bp) protein (148aa)

This feature has no annotations

Displaying 15 items

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