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anamox3_curated_scaffold_2923

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2923_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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282..638
DNA (357bp) protein (119aa)
Tetratricopeptide TPR_2 repeat protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CTP8_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY21925.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
anamox3_curated_scaffold_2923_2
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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comp(727..1332)
DNA (606bp) protein (202aa)
Elongation factor Ts Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5ENM8_CORAD
translation elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
anamox3_curated_scaffold_2923_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1356..2147)
DNA (792bp) protein (264aa)
30S ribosomal protein S2 Tax=Pedosphaera parvula Ellin514 RepID=B9XRC5_9BACT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S2
anamox3_curated_scaffold_2923_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2349..3371)
DNA (1023bp) protein (341aa)
PfkB domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XCX3_9BACT
PfkB domain protein {ECO:0000313|EMBL:EEF62319.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ribokinase-like domain-containing protein
anamox3_curated_scaffold_2923_5
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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3595..4575
DNA (981bp) protein (327aa)
Dehydrogenase homolog bin=GWF2_Planctomycete_41_51 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
dehydrogenase-like protein
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
anamox3_curated_scaffold_2923_6
unknown

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4793..5245
DNA (453bp) protein (151aa)

This feature has no annotations

anamox3_curated_scaffold_2923_7
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5945..8269
DNA (2325bp) protein (775aa)
Protein translocase subunit SecA Tax=Chthoniobacter flavus Ellin428 RepID=B4D6C4_9BACT
secA; preprotein translocase subunit SecA (ATPase, RNA helicase)
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_2923_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8266..9318
DNA (1053bp) protein (351aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase Tax=Pedosphaera parvula Ellin514 RepID=B9XIV4_9BACT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
anamox3_curated_scaffold_2923_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9384..10169
DNA (786bp) protein (262aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
pantothenate kinase (EC:2.7.1.33)
putative transcriptional acitvator, Baf family protein Tax=Verrucomicrobium spinosum RepID=UPI0001746180
anamox3_curated_scaffold_2923_10
CG_Arma_01, Armatimonadetes, Bacteria

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comp(10166..11419)
DNA (1254bp) protein (418aa)
3'-5' exonuclease Tax=Chthoniobacter flavus Ellin428 RepID=B4D6R3_9BACT
ribonuclease D
Tax=CG_Arma_01
anamox3_curated_scaffold_2923_11
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(11425..13188)
DNA (1764bp) protein (588aa)
Single-stranded DNA-specific exonuclease RecJ bin=GWF2_Lentisphaerae_57_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
single-stranded-DNA-specific exonuclease RecJ
Tax=GWF2_Lentisphaerae_57_35_curated
anamox3_curated_scaffold_2923_12
unknown

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comp(13185..14135)
DNA (951bp) protein (317aa)

This feature has no annotations

anamox3_curated_scaffold_2923_13
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(14132..15007)
DNA (876bp) protein (292aa)
thrB; Homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
Homoserine kinase Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=U5HK54_TEPAE
anamox3_curated_scaffold_2923_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15027..15371)
DNA (345bp) protein (115aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Aspartate 1-decarboxylase Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW6_9BACT
L-aspartate-alpha-decarboxylase
anamox3_curated_scaffold_2923_15
unknown

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15373..15579
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 15 items

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