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anamox3_curated_scaffold_3610

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_3610_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..293)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Photobacterium sp. AK15 RepID=L8JHM1_9GAMM
Hypothetical protein (sugar utilization related)
Tax=RBG_16_Betaproteobacteria_58_11_curated
anamox3_curated_scaffold_3610_2
unknown

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comp(444..944)
DNA (501bp) protein (167aa)

This feature has no annotations

anamox3_curated_scaffold_3610_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(957..1604)
DNA (648bp) protein (216aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
trpF; N-(5'-phosphoribosyl)anthranilate isomerase TrpF (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase Tax=Pedosphaera parvula Ellin514 RepID=B9XH50_9BACT
anamox3_curated_scaffold_3610_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1739..1987
DNA (249bp) protein (83aa)
Acyl carrier protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ13_9BACT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acpP; acyl carrier protein
anamox3_curated_scaffold_3610_5
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2060..3316
DNA (1257bp) protein (419aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Pedosphaera parvula Ellin514 RepID=B9XSV4_9BACT
3-oxoacyl-(acyl-carrier-protein) synthase 2
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
anamox3_curated_scaffold_3610_6
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3344..3592
DNA (249bp) protein (83aa)
50S ribosomal protein L31 Tax=Methylacidiphilum infernorum (isolate V4) RepID=RL31_METI4
rpmE; ribosomal protein L31
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_3610_7
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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3653..4690
DNA (1038bp) protein (346aa)
Holliday junction ATP-dependent DNA helicase RuvB bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ruvB; Holliday junction DNA helicase RuvB
Tax=GWF2_Lentisphaerae_57_35_curated
anamox3_curated_scaffold_3610_8
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

4687..5823
DNA (1137bp) protein (379aa)
Putative uncharacterized protein bin=GWC2_Bacteroidetes_40_22 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
anamox3_curated_scaffold_3610_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5854..6540
DNA (687bp) protein (229aa)
MotA/TolQ/ExbB proton channel Tax=Chthoniobacter flavus Ellin428 RepID=B4D8P8_9BACT
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EDY17270.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
flagellar motor protein MotA
anamox3_curated_scaffold_3610_10
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6537..6962
DNA (426bp) protein (142aa)
Biopolymer transport protein exbD1 Tax=Methyloversatilis universalis FAM5 RepID=F5R9N2_9RHOO
Biopolymer transport protein ExbD/TolR
Tax=RBG_16_Gamma2_60_9_curated
anamox3_curated_scaffold_3610_11
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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7105..8004
DNA (900bp) protein (300aa)
Protein TolA Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UM78_9DELT
Protein TolA {ECO:0000313|EMBL:EPR35049.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
protein TolA
anamox3_curated_scaffold_3610_12
unknown

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comp(7985..8410)
DNA (426bp) protein (142aa)

This feature has no annotations

anamox3_curated_scaffold_3610_13
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

9131..9673
DNA (543bp) protein (181aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI0003704B8C
peptidoglycan-associated lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
anamox3_curated_scaffold_3610_14
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

9670..9927
DNA (258bp) protein (86aa)
Sec-independent protein translocase protein tatA/E homolog (Modular protein) Tax=Methylacidiphilum fumariolicum SolV RepID=I0JZ65_9BACT
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
twin-arginine translocation protein, TatA/E family subunit
anamox3_curated_scaffold_3610_trna_1
unknown

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10039..10121
DNA (83bp)
transferRNA Leu
anamox3_curated_scaffold_3610_15

Not on your lists

comp(10623..11315)
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XEC5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48648.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
anamox3_curated_scaffold_3610_16
unknown

Not on your lists

11411..11611
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 17 items

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