ggKbase home page

anamox3_curated_scaffold_1988

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1988_1
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3..710
DNA (708bp) protein (236aa)
Phosphatidate cytidylyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XS11_9BACT
cdsA; phosphatidate cytidylyltransferase
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_1988_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(656..1675)
DNA (1020bp) protein (340aa)
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:EEF62498.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EEF62498.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Mannose-6-phosphate isomerase Tax=Pedosphaera parvula Ellin514 RepID=B9XC30_9BACT
mannose-6-phosphate isomerase
anamox3_curated_scaffold_1988_3
unknown

Not on your lists

1918..3606
DNA (1689bp) protein (563aa)

This feature has no annotations

anamox3_curated_scaffold_1988_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3893..5608
DNA (1716bp) protein (572aa)
Asparagine synthetase bin=GWA2_Elusimicrobia_56_46 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
anamox3_curated_scaffold_1988_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

5605..6765
DNA (1161bp) protein (387aa)
Glycosyl transferase, family 9 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LF70_SYNFM
glycosyl transferase family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
anamox3_curated_scaffold_1988_6
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6792..7943
DNA (1152bp) protein (384aa)
Glycosyl transferase group 1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QID2_DESB2
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
anamox3_curated_scaffold_1988_7
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7959..9140
DNA (1182bp) protein (394aa)
Uncharacterized protein Tax=Enterobacter sp. R4-368 RepID=R9VS95_9ENTR
Group 1 glycosyl transferase {ECO:0000313|EMBL:KJR40859.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiemensis.;"
hypothetical protein
anamox3_curated_scaffold_1988_8
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(9209..10951)
DNA (1743bp) protein (581aa)
ABC-type multidrug transport system, ATPase and permease component bin=GWF2_Lentisphaerae_57_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
Tax=GWF2_Lentisphaerae_57_35_curated
anamox3_curated_scaffold_1988_9
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

11137..12144
DNA (1008bp) protein (336aa)
Putative uncharacterized protein bin=GWF2_Planctomycetes_42_9 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=GWF2_Planctomycetes_42_9_curated
anamox3_curated_scaffold_1988_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

12196..13386
DNA (1191bp) protein (397aa)
Uroporphyrinogen-III decarboxylase-like protein bin=GWF2_Lentisphaerae_50_93 species=Epulopiscium sp. 'N.t. morphotype B' genus=Epulopiscium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
uroporphyrinogen-III decarboxylase-like protein
Tax=GWF2_Lentisphaerae_50_93_curated
anamox3_curated_scaffold_1988_11
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13509..14690
DNA (1182bp) protein (394aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XT54_9BACT
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox3_curated_scaffold_1988_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14746..16797
DNA (2052bp) protein (684aa)
putative oxidoreductase (EC:1.1.1.-)
Putative oxidoreductase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2A6_ANATU
Uncharacterized protein {ECO:0000313|EMBL:ETX01438.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
anamox3_curated_scaffold_1988_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16825..17898
DNA (1074bp) protein (358aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Probable dual-specificity RNA methyltransferase RlmN Tax=Pedosphaera parvula Ellin514 RepID=B9XSY7_9BACT
radical SAM enzyme, Cfr family
anamox3_curated_scaffold_1988_14
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

18026..19033
DNA (1008bp) protein (336aa)
Putative signal transduction protein with CBS domains Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GAF8_SPITZ
putative signal transduction protein
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:AEJ61777.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
anamox3_curated_scaffold_1988_15
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19030..19353
DNA (324bp) protein (108aa)
DRTGG domain-containing protein bin=GWF2_WWE1_40_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1
thiamine biosynthesis protein ThiC
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
anamox3_curated_scaffold_1988_16
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

19350..19859
DNA (510bp) protein (170aa)
NADH dehydrogenase (Ubiquinone), 24 kDa subunit Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZ48_ROSS1
bidirectional hydrogenase complex protein HoxE
NADH dehydrogenase (Ubiquinone), 24 kDa subunit {ECO:0000313|EMBL:ABQ91901.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
anamox3_curated_scaffold_1988_17
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

19852..20331
DNA (480bp) protein (160aa)
Histidine kinase Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B928_THEAS
histidine kinase
Tax=RBG_13_Aminicenantes_63_10_curated
anamox3_curated_scaffold_1988_18
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20328..20693
DNA (366bp) protein (122aa)
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTQ4_ACEAZ
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein {ECO:0000313|EMBL:ADL11818.1}; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
anamox3_curated_scaffold_1988_19
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20690..22504
DNA (1815bp) protein (605aa)
fhbB; FhbB (EC:1.6.5.3)
NAD-reducing hydrogenase subunit HoxF {ECO:0000313|EMBL:CCC57856.1}; EC=1.12.1.2 {ECO:0000313|EMBL:CCC57856.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
NAD-reducing hydrogenase subunit HoxF Tax=Caloramator australicus RC3 RepID=G0V416_9CLOT
anamox3_curated_scaffold_1988_20
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

22501..24303
DNA (1803bp) protein (601aa)
Ferredoxin Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z2N3_9BACT
Ferredoxin {ECO:0000313|EMBL:EFC92046.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibrio peptidovorans DSM 11002.;"
NADH:ubiquinone oxidoreductase subunit G, iron-sulfur binding protein
anamox3_curated_scaffold_1988_21

Not on your lists

24300..24842
DNA (543bp) protein (181aa)
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RUD3_ALLVD
Marine sediment metagenome DNA, contig: S06H3_S04311 {ECO:0000313|EMBL:GAI24204.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NADH ubiquinone oxidoreductase 20 kDa subunit
anamox3_curated_scaffold_1988_22
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

24872..26299
DNA (1428bp) protein (476aa)
NAD-reducing hydrogenase HoxS beta subunit (EC:1.12.1.2)
NAD-reducing hydrogenase HoxS beta subunit {ECO:0000313|EMBL:ACI19743.1}; EC=1.12.1.2 {ECO:0000313|EMBL:ACI19743.1};; species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).;"
NAD-reducing hydrogenase HoxS beta subunit Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YB69_DICT6
anamox3_curated_scaffold_1988_23
unknown

Not on your lists

comp(26160..26795)
DNA (636bp) protein (212aa)

This feature has no annotations

Displaying 23 items

View Taxonomy