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anamox3_curated_scaffold_1270

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1270_1
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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2..703
DNA (702bp) protein (234aa)
putative methyltransferase CmuC bin=GWF2_Melainabacteria_37_15 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
hypothetical protein
Tax=GWF1_Spirochaetes_41_5_curated
anamox3_curated_scaffold_1270_2
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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821..1192
DNA (372bp) protein (124aa)
Glycoside hydrolase family 38 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
glycoside hydrolase family protein
Tax=GWF2_Planctomycetes_41_51_curated
anamox3_curated_scaffold_1270_3
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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1189..2001
DNA (813bp) protein (271aa)
dppA; putative D-aminopeptidase (EC:3.4.11.-)
D-aminopeptidase bin=GWC2_Clostridiales_40_7 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Tax=GWF2_Lentisphaerae_44_16_curated
anamox3_curated_scaffold_1270_4
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2310..3098
DNA (789bp) protein (263aa)
Imidazole glycerol phosphate synthase subunit HisF bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Imidazole glycerol phosphate synthase cyclase subunit
Tax=GWD2_Desulfuromonadales_54_10_curated
anamox3_curated_scaffold_1270_5
unknown

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comp(3059..3865)
DNA (807bp) protein (269aa)

This feature has no annotations

anamox3_curated_scaffold_1270_6
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3837..5891)
DNA (2055bp) protein (685aa)
adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase {ECO:0000313|EMBL:BAQ18423.1}; EC=4.6.1.1 {ECO:0000313|EMBL:BAQ18423.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
hypothetical protein Tax=Sandarakinorhabdus limnophila RepID=UPI0003B6C5F8
anamox3_curated_scaffold_1270_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5988..8528)
DNA (2541bp) protein (847aa)
Helicase ATP-dependent domain protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU70_OPITP
Helicase {ECO:0000313|EMBL:ETX05334.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
helicase
anamox3_curated_scaffold_1270_8
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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comp(8645..9622)
DNA (978bp) protein (326aa)
Uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
nitrilase
Tax=GWF2_Lentisphaerae_44_16_curated
anamox3_curated_scaffold_1270_9
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9709..10683)
DNA (975bp) protein (325aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
Methionyl-tRNA formyltransferase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKV7_DESK7
anamox3_curated_scaffold_1270_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(10780..11985)
DNA (1206bp) protein (402aa)
Lysine 2,3-aminomutase YodO family protein {ECO:0000313|EMBL:EEF57153.1}; EC=5.4.3.2 {ECO:0000313|EMBL:EEF57153.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2)
Lysine 2,3-aminomutase YodO family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XSN4_9BACT
anamox3_curated_scaffold_1270_11
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

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comp(12210..12899)
DNA (690bp) protein (230aa)
Response regulator receiver domain protein (CheY-like) Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX44_9PROT
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:EAU53830.1}; species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
transcriptional regulator
anamox3_curated_scaffold_1270_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13068..15338)
DNA (2271bp) protein (757aa)
Protein-export membrane protein SecD Tax=Pedosphaera parvula Ellin514 RepID=B9XN52_9BACT
Protein-export membrane protein SecD {ECO:0000313|EMBL:EEF58714.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
secD; preprotein translocase subunit SecD
anamox3_curated_scaffold_1270_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15600..16898)
DNA (1299bp) protein (433aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Glutamate--tRNA ligase Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ9_9BACT
glutamyl-tRNA synthetase
anamox3_curated_scaffold_1270_14
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17305..20694)
DNA (3390bp) protein (1130aa)
transporter Tax=Pseudomonas chlororaphis RepID=UPI000365E61A
transporter
Transporter {ECO:0000313|EMBL:AIC19290.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
anamox3_curated_scaffold_1270_15
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21024..21566)
DNA (543bp) protein (181aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
Peptidyl-prolyl cis-trans isomerase Tax=Bacteriovorax sp. DB6_IX RepID=T0RQ25_9DELT
FKBP-type peptidyl-prolyl cis-trans isomerase
Displaying 15 items

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