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anamox3_curated_scaffold_3121

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_3121_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..1188
DNA (1188bp) protein (396aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA primase Tax=Pedosphaera parvula Ellin514 RepID=B9XFW4_9BACT
DNA primase
anamox3_curated_scaffold_3121_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1217..3127
DNA (1911bp) protein (637aa)
RNA polymerase sigma factor SigA Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV6_9BACT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
anamox3_curated_scaffold_3121_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3135..3884
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66200.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anamox3_curated_scaffold_3121_4
unknown

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comp(3902..4186)
DNA (285bp) protein (95aa)

This feature has no annotations

anamox3_curated_scaffold_3121_5
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(4198..6237)
DNA (2040bp) protein (680aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
DNA/RNA helicase, superfamily I Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RUP9_SYNP3
DNA/RNA helicase
anamox3_curated_scaffold_3121_6
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6327..7049
DNA (723bp) protein (241aa)
GDP-mannose--undecaprenyl-phosphate mannosyltransferase, putative bin=GWF2_Geobacter_54_21 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
glycosyl transferase family protein
Tax=GWC2_Geobacteraceae_55_20_curated
anamox3_curated_scaffold_3121_7
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7052..7972
DNA (921bp) protein (307aa)
Aldose 1-epimerase Tax=Chthoniobacter flavus Ellin428 RepID=B4DBD6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGM02167.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
aldose 1-epimerase
anamox3_curated_scaffold_3121_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8082..9239
DNA (1158bp) protein (386aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XRY1_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF57392.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase domain-containing protein
anamox3_curated_scaffold_3121_9

Not on your lists

9322..9924
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Holliday junction ATP-dependent DNA helicase RuvA Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N1_9BACT
Holliday junction DNA helicase RuvA
anamox3_curated_scaffold_3121_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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10004..10714
DNA (711bp) protein (237aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
Tax=CSP1_3_Armatimonadetes
anamox3_curated_scaffold_3121_11
CG_Arma_02, Armatimonadetes, Bacteria

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10733..11101
DNA (369bp) protein (123aa)
CoA-binding domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQF0_9BACT
CoA-binding domain-containing protein
Tax=CG_Arma_02
anamox3_curated_scaffold_3121_12
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(11174..12652)
DNA (1479bp) protein (493aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCC0_GEOUR
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox3_curated_scaffold_3121_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(12697..14358)
DNA (1662bp) protein (554aa)
DNA mismatch repair protein MutS Tax=Pedosphaera parvula Ellin514 RepID=B9XNR3_9BACT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA mismatch repair protein MutS
Displaying 13 items

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