ggKbase home page

anamox3_curated_scaffold_1256

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1256_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..242)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=S9ZG03_9RHOO
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(306..3101)
DNA (2796bp) protein (932aa)
Molybdopterin oxidoreductase Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZSU1_DESOH
molybdopterin oxidoreductase
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_3
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3655..4215
DNA (561bp) protein (187aa)
MarR family transcriptional regulator Tax=Rhodococcus ruber BKS 20-38 RepID=M3A3R6_9NOCA
MarR family transcriptional regulator {ECO:0000313|EMBL:EME67114.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
MarR family transcriptional regulator
anamox3_curated_scaffold_1256_trna_1
unknown

Not on your lists

4802..4873
DNA (72bp)
transferRNA Arg
anamox3_curated_scaffold_1256_4
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4939..6327)
DNA (1389bp) protein (463aa)
hypothetical protein Tax=Rhizobium giardinii RepID=UPI00035F320C
cyclase
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_5
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(6360..7316)
DNA (957bp) protein (319aa)
Epoxide hydrolase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ephA2; epoxide hydrolase
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(7313..8629)
DNA (1317bp) protein (439aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B37341
L-carnitine dehydratase/bile acid-inducible protein F
Tax=CG_Dehalo_01
anamox3_curated_scaffold_1256_7
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(8626..9825)
DNA (1200bp) protein (400aa)
CoA-transferase (EC:2.8.3.-)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003648B22
Tax=RBG_13_Chloroflexi_52_14_curated
anamox3_curated_scaffold_1256_8
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(9877..11106)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=Salinispora tropica RepID=UPI0003700799
major facilitator transporter
Tax=RBG_16_Chloroflexi_48_8_curated
anamox3_curated_scaffold_1256_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(11176..13629)
DNA (2454bp) protein (818aa)
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1E6_9CHLR
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit {ECO:0000313|EMBL:EFH80797.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
radical SAM protein
anamox3_curated_scaffold_1256_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13736..14167
DNA (432bp) protein (144aa)
hypothetical protein Tax=Paenibacillus ginsengihumi RepID=UPI000370CD77
HxlR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
anamox3_curated_scaffold_1256_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

14243..14860
DNA (618bp) protein (206aa)
hypothetical protein Tax=cellular organisms RepID=UPI000360FF0C
dephospho-CoA kinase
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_12

Not on your lists

14887..15756
DNA (870bp) protein (290aa)
hypothetical protein Tax=cellular organisms RepID=UPI0003730FD4
Uncharacterized protein {ECO:0000313|EMBL:KKK77292.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATPase
anamox3_curated_scaffold_1256_13
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

15759..16370
DNA (612bp) protein (204aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B51C6F
metallo-dependent phosphatase
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_14
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

16464..19703
DNA (3240bp) protein (1080aa)
hypothetical protein Tax=cellular organisms RepID=UPI00037FD67B
von Willebrand factor type A
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_15
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19707..20201
DNA (495bp) protein (165aa)
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=RBG_13_Actinobacteria_63_9_curated
anamox3_curated_scaffold_1256_16
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

20204..20827
DNA (624bp) protein (208aa)
Phosphoglycerate mutase Tax=uncultured Chloroflexi bacterium RepID=H5SPD4_9CHLR
phosphoglycerate mutase
Tax=RBG_16_Chloroflexi_64_32_curated
anamox3_curated_scaffold_1256_17
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(20831..22486)
DNA (1656bp) protein (552aa)
AAA ATPase central domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7N1_SPHTD
AAA ATPase
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_18
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(22524..24884)
DNA (2361bp) protein (787aa)
Endonuclease MutS2 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I002_CALAS
mutS2; MutS2 protein
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_19

Not on your lists

25008..26561
DNA (1554bp) protein (518aa)
Putative biotin carboxylase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4L5_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KKM52250.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative biotin carboxylase
anamox3_curated_scaffold_1256_20
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26543..27061
DNA (519bp) protein (173aa)
3-methylcrotonoyl-CoA carboxylase subunit alpha (EC:6.4.1.4)
3-methylcrotonoyl-CoA carboxylase, alpha subunit Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVB6_RUBXD
Tax=RBG_13_Deltaproteobacteria_65_10_curated
anamox3_curated_scaffold_1256_21
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

27454..28956
DNA (1503bp) protein (501aa)
Putative uncharacterized protein Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RDC9_THETN
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_22

Not on your lists


28985..29809
DNA (825bp) protein (275aa)
dimethyladenosine transferase (EC:2.1.1.48)
Putative ribosomal RNA adenine dimethylase Tax=uncultured marine microorganism HF4000_010I05 RepID=B3T1I1_9ZZZZ
Putative ribosomal RNA adenine dimethylase {ECO:0000313|EMBL:ABZ06440.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_010I05.;"
anamox3_curated_scaffold_1256_23

Not on your lists

29802..30665
DNA (864bp) protein (288aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
Putative GHMP kinases putative ATP-binding protein Tax=uncultured marine microorganism HF4000_010I05 RepID=B3T1I0_9ZZZZ
Marine sediment metagenome DNA, contig: S01H1_S02033 {ECO:0000313|EMBL:GAF90970.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox3_curated_scaffold_1256_24
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

30662..31075
DNA (414bp) protein (138aa)
id=24556309 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_Chloroflexi_64_32_curated
anamox3_curated_scaffold_1256_25
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

31126..31839
DNA (714bp) protein (238aa)
PHP domain-containing protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PHP domain-containing protein
Tax=RBG_16_Chloroflexi_68_14_curated
anamox3_curated_scaffold_1256_26
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

31846..33111
DNA (1266bp) protein (422aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
anamox3_curated_scaffold_1256_trna_4
unknown

Not on your lists

comp(33157..33229)
DNA (73bp)
transferRNA Arg
anamox3_curated_scaffold_1256_trna_3
unknown

Not on your lists

comp(33245..33328)
DNA (84bp)
transferRNA Leu
anamox3_curated_scaffold_1256_trna_2
unknown

Not on your lists

comp(33391..33464)
DNA (74bp)
transferRNA Val
Displaying items 1-30 of 44 in total

View Taxonomy